RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 NANOGQ9H9S0 305 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TPT1P8Q9HAU6 139 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SEMA3GQ9NS98 782 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZCCHC3Q9NUD5 404 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 DDX18Q9NVP1 670 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 IL17BQ9UHF5 180 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 KCND3Q9UK17 655 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SYNDIG1LA6NDD5 238 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 A8MUI8 341 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 NME6O75414 186 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CYC1P08574 325 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ADRB1P08588 477 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 UQCRC2P22695 453 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 MMP11P24347 488 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GALNSP34059 522 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GSSP48637 474 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PCYT1AP49585 367 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RASSF2P50749 326 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PRKAG1P54619 331 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CASP9P55211 416 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PRR5P85299 388 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 EEF1A2Q05639 463 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 MAP4K2Q12851 820 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 IL10RAQ13651 578 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SELPLGQ14242 412 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF267Q14586 743 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 EXOSC7Q15024 291 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SPDYE7PQ495Y7 208 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RABL3Q5HYI8 236 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 FHL5Q5TD97 284 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C6orf163Q5TEZ5 329 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 HACD2Q6Y1H2 254 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PGAM4Q8N0Y7 254 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ARHGAP24Q8N264 748 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 HSPBAP1Q96EW2 488 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RBM14Q96PK6 669 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RAB3IPQ96QF0 476 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GPATCH1Q9BRR8 931 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GPN2Q9H9Y4 310 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 FANCFQ9NPI8 374 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GPATCH2Q9NW75 528 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PTGFRNQ9P2B2 879 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 NKX1-2Q9UD57 310 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C19orf25Q9UFG5 118 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 FAF1Q9UNN5 650 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ERVK-19Q9WJR5 959 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PCDHGA6Q9Y5G7 932 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 HS3ST3B1Q9Y662 390 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PCSK5Q92824 1860 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 A0A087WV62 115 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CLIC1O00299 241 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 GYG2O15488 501 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 EMC8O43402 210 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PLOD3O60568 738 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 HNRNPCL1O60812 293 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SLITRK5O94991 958 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 KRT75O95678 551 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CBX7O95931 251 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 S1PR1P21453 382 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SSTR4P31391 388 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 OTX2P32243 289 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CHI3L1P36222 383 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SLC7A2P52569 658 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PSME3P61289 254 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SRSF6Q13247 344 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SSPNQ14714 243 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 MOGQ16653 247 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 RUNDC3AQ59EK9 446 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 PAPD4Q6PIY7 484 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 KIRREL2Q6UWL6 708 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C16orf89Q6UX73 402 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 TMEM64Q6YI46 380 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 B3GNT6Q6ZMB0 384 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 CPEB2Q7Z5Q1 589 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 VASH2Q86V25 355 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 C10orf111Q8N326 155 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 OR2L13Q8N349 312 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF321PQ8N8H1 164 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 NUP43Q8NFH3 380 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SLC2A12Q8TD20 617 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 DAZLQ92904 295 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 DGCR14Q96DF8 476 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SENP5Q96HI0 755 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 COX4I2Q96KJ9 171 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 HOPXQ9BPY8 73 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 WDR77Q9BQA1 342 aaPredicted RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 BTBD10Q9BSF8 475 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 THUMPD3Q9BV44 507 aaKnown RBP6.39□□□□□ -1.39
SCAF4-204ENST00000467731 OR8D2Q9GZM6 311 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 EQTNQ9NQ60 294 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 ZNF639Q9UID6 485 aa6.39□□□□□ -1.39
SCAF4-204ENST00000467731 SOCS6O14544 535 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DYRK3O43781 588 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 DDAH2O95865 285 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 HMGN2P05204 90 aaKnown RBP6.38□□□□□ -1.39
SCAF4-204ENST00000467731 LIFP15018 202 aa6.38□□□□□ -1.39
SCAF4-204ENST00000467731 VHLP40337 213 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms