RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663		A0A087WV62	115 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	IGHV3-20	A0A0C4DH32	117 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ANKUB1	A6NFN9	424 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF860	A6NHJ4	632 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	AQP12B	A6NM10	295 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	EMC8	O43402	210 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	DNAJB6	O75190	326 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	FKBP6	O75344	327 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	SEC24D	O94855	1032 aa	Predicted RBP	11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	AGR2	O95994	175 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	FH	P07954	510 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	BMP2	P12643	396 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	CPM	P14384	443 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	CHI3L1	P36222	383 aa	Predicted RBP	11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	CDKN2C	P42773	168 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	CCT3	P49368	545 aa	Known RBP	11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	GSK3B	P49841	420 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	TNFSF10	P50591	281 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ARG2	P78540	354 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	VEZF1	Q14119	521 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	H3F3C	Q6NXT2	135 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ZFP1	Q6P2D0	407 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ZCCHC12	Q6PEW1	402 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	QSOX2	Q6ZRP7	698 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	CALHM3	Q86XJ0	350 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	AQP12A	Q8IXF9	295 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	MSRB3	Q8IXL7	192 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ST6GALNAC3	Q8NDV1	305 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	OR2T12	Q8NG77	320 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	OR1N1	Q8NGS0	311 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	PRR7	Q8TB68	274 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	GRHL3	Q8TE85	626 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	SSC4D	Q8WTU2	575 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	FAR1	Q8WVX9	515 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	STMN2	Q93045	179 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	REXO5	Q96IC2	774 aa	Known RBP	11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	LRGUK	Q96M69	825 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC39A3	Q9BRY0	314 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	PRTFDC1	Q9NRG1	225 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	PLA2G3	Q9NZ20	509 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	ESPL1	Q14674	2120 aa		11.2	□□□□□ -0.62
CTNS-205	ENST00000467663	TRAV17	A0A0B4J275	112 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	RNF103-CHMP3	A0A140T963	221 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	ELOVL7	A1L3X0	281 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	WIPF3	A6NGB9	483 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	TTC36	A6NLP5	189 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DUXA	A6NLW8	204 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	ACOT8	O14734	319 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DYRK3	O43781	588 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	MGRN1	O60291	552 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	PLOD3	O60568	738 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DDAH2	O95865	285 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	B3GALT4	O96024	378 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	UMPS	P11172	480 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	MTPN	P58546	118 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	PLIN5	Q00G26	463 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	FOLH1	Q04609	750 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	STX4	Q12846	297 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	FLOT2	Q14254	428 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	GNA13	Q14344	377 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	RGN	Q15493	299 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	NSDHL	Q15738	373 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	INA	Q16352	499 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	EXT1	Q16394	746 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	BTBD16	Q32M84	506 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	SPDYE7P	Q495Y7	208 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	RABL3	Q5HYI8	236 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	INTS11	Q5TA45	600 aa	Known RBP	11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	ABHD17B	Q5VST6	288 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	SAXO2	Q658L1	398 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	LCN8	Q6JVE9	175 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DHFR2	Q86XF0	187 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	CCDC116	Q8IYX3	515 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	MMP21	Q8N119	569 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	OR10A6	Q8NH74	314 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	SUN3	Q8TAQ9	357 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	M1AP	Q8TC57	530 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	MIPOL1	Q8TD10	442 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	NUDT8	Q8WV74	236 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	RBM18	Q96H35	190 aa	Known RBP	11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	CLPTM1L	Q96KA5	538 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF583	Q96ND8	569 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	CSF3R	Q99062	836 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	RBCK1	Q9BYM8	510 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	TMEM38A	Q9H6F2	299 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	GORASP2	Q9H8Y8	452 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	MMP25	Q9NPA2	562 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	STMN3	Q9NZ72	180 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	TEKT2	Q9UIF3	430 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	SNX13	Q9Y5W8	968 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	COL12A1	Q99715	3063 aa		11.19	□□□□□ -0.62
CTNS-205	ENST00000467663	PRRC2C	Q9Y520	2896 aa	Known RBP	11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	OR5H15	A6NDH6	313 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	TMEM247	A6NEH6	219 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	GLOD5	A6NK44	160 aa		11.18	□□□□□ -0.62
CTNS-205	ENST00000467663	ASNA1	O43681	348 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms