RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 SLC22A31A6NKX4 558 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 SYNGR4O95473 234 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 AIFM1O95831 613 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 DAOP14920 347 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 IFNGR1P15260 489 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 PGCP20142 388 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 CPN2P22792 545 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 CD40P25942 277 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 HMGCS1Q01581 520 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TGM3Q08188 693 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 SP140Q13342 867 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 MLC1Q15049 377 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 ZNHIT3Q15649 155 aaPredicted RBP11.08□□□□□ -0.64
UBR4-210ENST00000466969 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TIMM23BQ5SRD1 257 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 KPRPQ5T749 579 aaPredicted RBP11.08□□□□□ -0.64
UBR4-210ENST00000466969 DUPD1Q68J44 220 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 GTF2IRD2BQ6EKJ0 949 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 MFSD12Q6NUT3 480 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 BBS12Q6ZW61 710 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 GTF2IRD2Q86UP8 949 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 SIGLECL1Q8N7X8 197 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TOR1AIP2Q8NFQ8 470 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TRIM58Q8NG06 486 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 OR4K17Q8NGC6 315 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 ACTL9Q8TC94 416 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 MAPKAP1Q9BPZ7 522 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 HEMGNQ9BXL5 484 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 PARVBQ9HBI1 364 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 KLHL42Q9P2K6 505 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 CORINQ9Y5Q5 1042 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.64
UBR4-210ENST00000466969 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 SPOPO43791 374 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 ZNF189O75820 626 aaPredicted RBP11.07□□□□□ -0.64
UBR4-210ENST00000466969 NTN1O95631 604 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 AVPP01185 164 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 CLPSP04118 112 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 RNASE1P07998 156 aaKnown RBP11.07□□□□□ -0.64
UBR4-210ENST00000466969 HK1P19367 917 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 SSTR4P31391 388 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 SLC1A1P43005 524 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 RASGEF1BQ0VAM2 473 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBR4-210ENST00000466969 TMEM201Q5SNT2 666 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 ZNF470Q6ECI4 717 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 ASPHD2Q6ICH7 369 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 BBOF1Q8ND07 529 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 OR52B6Q8NGF0 335 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 OR56A3Q8NH54 315 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 GIMAP7Q8NHV1 300 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 TAF15Q92804 592 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBR4-210ENST00000466969 ADIPOR1Q96A54 375 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 TMIGD2Q96BF3 282 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 LRRC58Q96CX6 371 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 TCF12Q99081 682 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 SLC52A3Q9NQ40 469 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 CHRAC1Q9NRG0 131 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 PAQR5Q9NXK6 330 aaPredicted RBP11.07□□□□□ -0.64
UBR4-210ENST00000466969 ADAMTS6Q9UKP5 1117 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 CAPN11Q9UMQ6 739 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 COL7A1Q02388 2944 aa11.07□□□□□ -0.64
UBR4-210ENST00000466969 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 EIF1AYO14602 144 aaKnown RBP11.06□□□□□ -0.64
UBR4-210ENST00000466969 LYZL6O75951 148 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 PRSS23O95084 383 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 C8GP07360 202 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 OMGP23515 440 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 ZNF83P51522 516 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 HNRNPH2P55795 449 aaKnown RBP11.06□□□□□ -0.64
UBR4-210ENST00000466969 PLCXD2Q0VAA5 305 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 BAMBIQ13145 260 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 P2RY8Q86VZ1 359 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 CPNE9Q8IYJ1 553 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 C17orf47Q8NEP4 570 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 TMCO6Q96DC7 493 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 OMA1Q96E52 524 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 ROGDIQ9GZN7 287 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 DDX47Q9H0S4 455 aaKnown RBP11.06□□□□□ -0.64
UBR4-210ENST00000466969 RAB1BQ9H0U4 201 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 FKRPQ9H9S5 495 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 STOML1Q9UBI4 398 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 MID2Q9UJV3 735 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 HYOU1Q9Y4L1 999 aa11.06□□□□□ -0.64
UBR4-210ENST00000466969 ANKDD1BA6NHY2 528 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 UGT2B11O75310 529 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 TSPAN15O95858 294 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 ERCC1P07992 297 aaPredicted RBP11.05□□□□□ -0.64
UBR4-210ENST00000466969 ADRA2CP18825 462 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 GSTM2P28161 218 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 PCGF2P35227 344 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 NNATQ16517 81 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 TAF9Q16594 264 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 MST1LQ2TV78 715 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 TDRPQ86YL5 185 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 RELL1Q8IUW5 271 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
UBR4-210ENST00000466969 KIR3DL3Q8N743 410 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms