RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 A4GNTQ9UNA3 340 aa13.13□□□□□ -0.31
TGFBR3-204ENST00000465892 SIRT4Q9Y6E7 314 aaPredicted RBP13.13□□□□□ -0.31
TGFBR3-204ENST00000465892 ZC3H12DA2A288 527 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 KHNYNO15037 678 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC28A2O43868 658 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC2A10O95528 541 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 PLATP00750 562 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 IFNA16P05015 189 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ALDOBP05062 364 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 URODP06132 367 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ARHGDIBP52566 201 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ZP1P60852 638 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 DGCR2P98153 550 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ZNF155Q12901 538 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 KCNA10Q16322 511 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 VASNQ6EMK4 673 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 GCDHQ92947 438 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 TEFMQ96QE5 360 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 C2orf49Q9BVC5 232 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 QRSL1Q9H0R6 528 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 PLXND1Q9Y4D7 1925 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 TBXA2RP21731 343 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 AP1S2P56377 157 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 C21orf58P58505 322 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC36A2Q495M3 483 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SGTBQ96EQ0 304 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SCRN2Q96FV2 425 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 YIPF4Q9BSR8 244 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 TAAR2Q9P1P5 351 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ADAM12O43184 909 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC19A2O60779 497 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 KLHL18O94889 574 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 MANFP55145 182 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 GSG1Q2KHT4 349 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 EOGTQ5NDL2 527 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 MED27Q6P2C8 311 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SMAP2Q8WU79 429 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 FCRL4Q96PJ5 515 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 SMG9Q9H0W8 520 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CYSLTR2Q9NS75 346 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 CFAP97Q9P2B7 532 aa13.12□□□□□ -0.31
TGFBR3-204ENST00000465892 PLXNA3P51805 1871 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 CHURC1-FNTBB4DL54 471 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ATG13O75143 517 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 IMPA1P29218 277 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 PDHA2P29803 388 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 LCN1P31025 176 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 AP1S1P61966 158 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ELOAQ14241 798 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 SLC25A35Q3KQZ1 300 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 NLRC3Q7RTR2 1065 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 OR51G2Q8NGK0 314 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 OR2T4Q8NH00 348 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 BRI3BPQ8WY22 251 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 KLK6Q92876 244 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 PDXPQ96GD0 296 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 SAV1Q9H4B6 383 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 BRF2Q9HAW0 419 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 CHST2Q9Y4C5 530 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 SERTM1A2A2V5 107 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ZNF840PA6NDX5 716 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 B4GALT2O60909 372 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 H2AFB2P0C5Z0 115 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ACSL1P33121 698 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 BUD31P41223 144 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 BLVRAP53004 296 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 RPS7P62081 194 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 CDK5Q00535 292 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ZNF273Q14593 569 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 TAS1R1Q7RTX1 841 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 MOSPD2Q8NHP6 518 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
TGFBR3-204ENST00000465892 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms