RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CXorf36Q9H7Y0 433 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 SACM1LQ9NTJ5 587 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 NTMQ9P121 344 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 VPS4AQ9UN37 437 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 OR10H1Q9Y4A9 318 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 CHCHD2Q9Y6H1 151 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 RELNP78509 3460 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 UBR5O95071 2799 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 BAHCC1Q9P281 2608 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 USP9XQ93008 2570 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PRSS51A0A1B0GVH4 220 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NPIPA5E9PKD4 350 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 RNASET2O00584 256 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 TP53I11O14683 189 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 SCN2BO60939 215 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 SLC22A3O75751 556 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 VIMP08670 466 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NAGAP17050 411 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 GABRA3P34903 492 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 CCT3P49368 545 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 TMED10P49755 219 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 HBA1P69905 142 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PRR5P85299 388 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 ALDH6A1Q02252 535 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 ZNHIT3Q15649 155 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 SPDYE7PQ495Y7 208 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 ANXA8L1Q5VT79 327 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 BICRALQ6AI39 1079 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PAOXQ6QHF9 649 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 ATCAYQ86WG3 371 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 FBXW8Q8N3Y1 598 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 GALNT11Q8NCW6 608 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 OR2M7Q8NG81 312 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 OR4A15Q8NGL6 344 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PSMA8Q8TAA3 256 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 FBXO30Q8TB52 745 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 SPPL2AQ8TCT8 520 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NR4A3Q92570 626 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 DIO2Q92813 273 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 FAM173AQ9BQD7 235 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 YIPF4Q9BSR8 244 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 LMF2Q9BU23 707 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PROK2Q9HC23 129 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NPHS2Q9NP85 383 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 ZCCHC3Q9NUD5 404 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 CNIH4Q9P003 139 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 CNOT11Q9UKZ1 510 aaKnown RBP11.38□□□□□ -0.59
CHPF2-202ENST00000465601 PCDHGB4Q9UN71 923 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 NPIPA1Q9UND3 350 aa11.38□□□□□ -0.59
CHPF2-202ENST00000465601 GXYLT2A0PJZ3 443 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 TSPAN2O60636 221 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 UGT2B11O75310 529 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 WISP1O95388 367 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 CBX6O95503 412 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 PGRP06401 933 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 ACP2P11117 423 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 GNLYP22749 145 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SOAT1P35610 550 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 MDH1P40925 334 aaKnown RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 PLGLB1Q02325 96 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SF3A3Q12874 501 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 TP53BP2Q13625 1128 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 DPY19L1Q2PZI1 675 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 CYP27C1Q4G0S4 372 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 CLEC4FQ8N1N0 589 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 MIER2Q8N344 545 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 CDRT4Q8N9R6 151 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 ZFP62Q8NB50 900 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 POGLUT1Q8NBL1 392 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 GLB1L3Q8NCI6 653 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 OR9I1Q8NGQ6 314 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 OR5AK3PQ8NH89 298 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 GPR151Q8TDV0 419 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SLC9A6Q92581 669 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 HGDQ93099 445 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 EFHD2Q96C19 240 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 OTUB1Q96FW1 271 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 COL21A1Q96P44 957 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 MS4A4EQ96PG1 132 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 OR52E6Q96RD3 313 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 NODALQ96S42 347 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 ADOQ96SZ5 270 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SLX1AQ9BQ83 275 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 NEUROD4Q9HD90 331 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SDR39U1Q9NRG7 319 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 FGFR1OP2Q9NVK5 253 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 ZIM2Q9NZV7 527 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 CBLCQ9ULV8 474 aa11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
CHPF2-202ENST00000465601 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms