RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 ACP2P11117 423 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 S100A3P33764 101 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SOAT1P35610 550 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 KIR3DL1P43629 444 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 CCT3P49368 545 aaKnown RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 DCAF7P61962 342 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 PLGLB1Q02325 96 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 MLC1Q15049 377 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 INAQ16352 499 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SPDYE7PQ495Y7 208 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 ACAD11Q709F0 780 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 ATCAYQ86WG3 371 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SLC34A3Q8N130 599 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 ARFGAP2Q8N6H7 521 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 FAM98AQ8NCA5 519 aaKnown RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 GALNT11Q8NCW6 608 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 OR4A15Q8NGL6 344 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 DNAJB8Q8NHS0 232 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 PRR7Q8TB68 274 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SLC9A6Q92581 669 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 ADOQ96SZ5 270 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SLX1AQ9BQ83 275 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 INPP5KQ9BT40 448 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 LMF2Q9BU23 707 aaKnown RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 DEFB127Q9H1M4 99 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 C3orf14Q9HBI5 128 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 TCF7L2Q9NQB0 619 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 ZCCHC3Q9NUD5 404 aaKnown RBP10.71□□□□□ -0.69
CUX1-207ENST00000465461 FLRT3Q9NZU0 649 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 OR10H1Q9Y4A9 318 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 EXPH5Q8NEV8 1989 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 ANKUB1A6NFN9 424 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 C17orf51A8MQB3 221 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 CAPN14A8MX76 684 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 ACOX3O15254 700 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 TSPAN2O60636 221 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 SLC22A3O75751 556 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 UNC5CO95185 931 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 TGDSO95455 350 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 IGKV1D-16P01601 117 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 HMGN2P05204 90 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 RFPL3SP0C7P2 107 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 IDO1P14902 403 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 ZNF24P17028 368 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 DDX5P17844 614 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 PTGDSP41222 190 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 CASP3P42574 277 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 CDKN2CP42773 168 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 ZFP36L2P47974 494 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 CLNS1AP54105 237 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 RPS26P62854 115 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 KCNJ2P63252 427 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 FOXO1Q12778 655 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 TP53BP2Q13625 1128 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 LASP1Q14847 261 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 DUSP5Q16690 384 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 PDCD4Q53EL6 469 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 CCNJQ5T5M9 372 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 MFSD12Q6NUT3 480 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 SIAH3Q8IW03 269 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 FBXW8Q8N3Y1 598 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 ZFP62Q8NB50 900 aaPredicted RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 SLC16A11Q8NCK7 471 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 OR8J2Q8NGG1 315 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 GPR151Q8TDV0 419 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 JADE3Q92613 823 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 TESCQ96BS2 214 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 CHMP6Q96FZ7 201 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 COL21A1Q96P44 957 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 MS4A4EQ96PG1 132 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 FAM173AQ9BQD7 235 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 TTTY12Q9BZ98 90 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 GALNT9Q9HCQ5 603 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 FGFR1OP2Q9NVK5 253 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 FBXO34Q9NWN3 711 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 SEC14L3Q9UDX4 400 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 CBLCQ9ULV8 474 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 HRH3Q9Y5N1 445 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 KCNE3Q9Y6H6 103 aa10.7□□□□□ -0.7
CUX1-207ENST00000465461 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 NUP214P35658 2090 aaPredicted RBP10.7□□□□□ -0.7
CUX1-207ENST00000465461 NINQ8N4C6 2090 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 A0A0G2JND7 137 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 PRSS51A0A1B0GVH4 220 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 RNASET2O00584 256 aaKnown RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 TP53I11O14683 189 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 GNB5O14775 395 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 TFECO14948 347 aaPredicted RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
CUX1-207ENST00000465461 GSNP06396 782 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 CELA3AP09093 270 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 CYP4B1P13584 511 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 EDN3P14138 238 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 NAGAP17050 411 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 IL12BP29460 328 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms