RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ASGR2P07307 311 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 AVPR1BP47901 424 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 HNRNPA0Q13151 305 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 ZMAT1Q5H9K5 638 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CLEC12AQ5QGZ9 265 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 OR2G6Q5TZ20 316 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 YAF2Q8IY57 180 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 IL17RDQ8NFM7 739 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 GATAD2BQ8WXI9 593 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 ELP4Q96EB1 424 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 CHFRQ96EP1 664 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 FAM46AQ96IP4 442 aaKnown RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 KCTD7Q96MP8 289 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 TRIM45Q9H8W5 580 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-204ENST00000465425 TMEM165Q9HC07 324 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 SPHK1Q9NYA1 384 aa17.2■□□□□ 0.34
SYNE4-204ENST00000465425 TMEM129A0AVI4 362 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 ISM1B1AKI9 464 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 STK25O00506 426 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 SLC30A4O14863 429 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 PROM1O43490 865 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 KCNJ13O60928 360 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 CCNKO75909 580 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 OR2B6P58173 313 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 MINDY4Q4G0A6 757 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 AGAP6Q5VW22 663 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 PRICKLE2Q7Z3G6 844 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 NRARPQ7Z6K4 114 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 CLDN22Q8N7P3 220 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 ANKK1Q8NFD2 765 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 PIGXQ8TBF5 258 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 UFD1Q92890 307 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 FGF11Q92914 225 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 AGAP4Q96P64 663 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 TEX12Q9BXU0 123 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 SFXN1Q9H9B4 322 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 MRPS18AQ9NVS2 196 aaKnown RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 SLC17A4Q9Y2C5 497 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 SLC35F4A4IF30 521 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 PRICKLE3O43900 615 aaPredicted RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 FCARP24071 287 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 MAP4K2Q12851 820 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 PLK5Q496M5 336 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 TJAP1Q5JTD0 557 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 FAM131AQ6UXB0 335 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 RASSF6Q6ZTQ3 369 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 MTSS1LQ765P7 747 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 OR14C36Q8NHC7 312 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 KAT2AQ92830 837 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 ZG16BQ96DA0 208 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 FGF20Q9NP95 211 aaPredicted RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 SEMA4GQ9NTN9 838 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 TOR4AQ9NXH8 423 aa17.19■□□□□ 0.34
SYNE4-204ENST00000465425 APOBEC3BQ9UH17 382 aaKnown RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 EXOSC1Q9Y3B2 195 aaKnown RBP17.19■□□□□ 0.34
SYNE4-204ENST00000465425 AP3D1O14617 1153 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 KRT8P05787 483 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 PEBP1P30086 187 aaKnown RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 BTN3A2P78410 334 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 GPM6BQ13491 265 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF79Q15937 498 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 RPE65Q16518 533 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 DUSP6Q16828 381 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 RSBN1Q5VWQ0 802 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 TYW3Q6IPR3 259 aaKnown RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 MFSD9Q8NBP5 474 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 OR8D4Q8NGM9 314 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ADAMTS15Q8TE58 950 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 CHAC2Q8WUX2 184 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 JPH3Q8WXH2 748 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 HERVK_113Q902F9 699 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ARHGDIGQ99819 225 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 SARGQ9BW04 601 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ACTRT3Q9BYD9 372 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 SLC17A9Q9BYT1 436 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 TRPV4Q9HBA0 871 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ABCB9Q9NP78 766 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 SNX7Q9UNH6 387 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 GPR55Q9Y2T6 319 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 PCDHGB2Q9Y5G2 931 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 COLEC10Q9Y6Z7 277 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 DOCK9Q9BZ29 2069 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 A8MU76 341 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 SLC9A3P48764 834 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 RGS8P57771 180 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 BAK1Q16611 211 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 CRTC2Q53ET0 693 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF544Q6NX49 715 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 PLEKHM3Q6ZWE6 761 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 NRROSQ86YC3 692 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 DIO2Q92813 273 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 RFKQ969G6 155 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 SRRQ9GZT4 340 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 ANKRD19PQ9H560 264 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 CACYBPQ9HB71 228 aaKnown RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 MOV10Q9HCE1 1003 aaKnown RBP17.18■□□□□ 0.34
SYNE4-204ENST00000465425 TIGARQ9NQ88 270 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 LYARQ9NX58 379 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms