RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 HOXC12P31275 282 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 GKP32189 559 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 THBS2P35442 1172 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SOX18P35713 384 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CRATP43155 626 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SLC6A12P48065 614 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SRP9P49458 86 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 DCDC1P59894 354 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ERVFC1P60507 584 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 POLR2GP62487 172 aaKnown RBP eCLIP6.11□□□□□ -1.43
SIK3-207ENST00000465421 RPS24P62847 133 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 RPL6Q02878 288 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 OPCMLQ14982 345 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 GPR68Q15743 365 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 KRBOX4Q5JUW0 171 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CDKL4Q5MAI5 379 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 HACD4Q5VWC8 232 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 WASH2PQ6VEQ5 465 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 LRRC70Q7Z2Q7 622 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 MEX3DQ86XN8 651 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 OR4N4Q8N0Y3 316 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ZFP41Q8N8Y5 198 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ADAMTS14Q8WXS8 1223 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ERMAPQ96PL5 475 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 DMRTA2Q96SC8 542 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 MTERF1Q99551 399 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 DPH7Q9BTV6 452 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CINPQ9BW66 212 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 NLNQ9BYT8 704 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 HDHD2Q9H0R4 259 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 DPAGT1Q9H3H5 408 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 NCOR1P1Q9H4R4 102 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 IL17CQ9P0M4 197 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 PPIEQ9UNP9 301 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 PCDHB9Q9Y5E1 797 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 XIRP2A4UGR9 3374 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ARPC4-TTLL3A0A0A6YYG9 625 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 PLSCR5A0PG75 271 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 A6NCN8 305 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 H3BNC9 293 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 LGALS8O00214 317 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 GABRPO00591 440 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SLC25A14O95258 325 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 PRAMEF12O95522 483 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 NFATC1O95644 943 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 TRBC1P01850 177 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 EIF4EP06730 217 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 FCER2P06734 321 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ELNP15502 786 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CXCL2P19875 107 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ELAVL4P26378 380 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 RBMS1P29558 406 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 CHI3L1P36222 383 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 XKP51811 444 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SMSP52788 366 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 INSL4Q14641 139 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 GPR33Q49SQ1 333 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 PABPC1L2AQ5JQF8 200 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 LRRC73Q5JTD7 316 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 FRG2Q64ET8 278 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CORO6Q6QEF8 472 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CASP12Q6UXS9 341 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 LRRC28Q86X40 367 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 FTMTQ8N4E7 242 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ZBTB2Q8N680 514 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 WDR20Q8TBZ3 569 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 ACOT12Q8WYK0 555 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 YIPF5Q969M3 257 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SIPA1Q96FS4 1042 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SFXN2Q96NB2 322 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CASD1Q96PB1 797 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 FRG2BQ96QU4 278 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SECISBP2Q96T21 854 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 SEPT5Q99719 369 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 ZNF649Q9BS31 505 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 OSGEPL1Q9H4B0 414 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 CWH43Q9H720 699 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 RC3H2Q9HBD1 1191 aaKnown RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 SPATA6Q9NWH7 488 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 ZNF282Q9UDV7 671 aaPredicted RBP6.11□□□□□ -1.43
SIK3-207ENST00000465421 MGAT4BQ9UQ53 548 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 BAIAP2Q9UQB8 552 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 SESN1Q9Y6P5 492 aa6.11□□□□□ -1.43
SIK3-207ENST00000465421 TP53BP1Q12888 1972 aaPredicted RBP6.1□□□□□ -1.43
SIK3-207ENST00000465421 KIF26AQ9ULI4 1882 aaPredicted RBP6.1□□□□□ -1.43
SIK3-207ENST00000465421 PTPRSQ13332 1948 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 CXorf51AA0A1B0GTR3 108 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 TCRBV16S1A1N1A0A5B0 115 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 TRBC2A0A5B9 178 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 AIPO00170 330 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 RNASET2O00584 256 aaKnown RBP6.1□□□□□ -1.43
SIK3-207ENST00000465421 ACP2P11117 423 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 POU3F2P20265 443 aaPredicted RBP6.1□□□□□ -1.43
SIK3-207ENST00000465421 ITGALP20701 1170 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 AOAHP28039 575 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 RECQLP46063 649 aaPredicted RBP6.1□□□□□ -1.43
SIK3-207ENST00000465421 ACSM1Q08AH1 577 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 RAB40BQ12829 278 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 FZD5Q13467 585 aa6.1□□□□□ -1.43
SIK3-207ENST00000465421 CAMK1Q14012 370 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms