RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TRIM9Q9C026 710 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ACTR8Q9H981 624 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 YAE1D1Q9NRH1 226 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 FAM114A2Q9NRY5 505 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 KLRF1Q9NZS2 232 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RAI14Q9P0K7 980 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RCOR3Q9P2K3 495 aaPredicted RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 ANKMY1Q9P2S6 941 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ATXN10Q9UBB4 475 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 GHRLQ9UBU3 117 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ISY1Q9ULR0 285 aaKnown RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 RNF24Q9Y225 148 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 GON4LQ3T8J9 2241 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 TTC26A0AVF1 554 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 TRIM49BA6NDI0 452 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 TRABD2BA6NFA1 517 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 MFSD2BA6NFX1 497 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 F8WDY8 70 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 H3BMH7 237 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 VPS26AO75436 327 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 SCGB2A1O75556 95 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 APBB3O95704 486 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 PPIAP62937 165 aaKnown RBP3.23□□□□□ -1.89
CLK1-208ENST00000464454 ZNF85Q03923 595 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 HSF2Q03933 536 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 CRMP1Q14194 572 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 EIF2B1Q14232 305 aaKnown RBP3.23□□□□□ -1.89
CLK1-208ENST00000464454 ADPRMQ3LIE5 342 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 DMKNQ6E0U4 476 aaPredicted RBP3.23□□□□□ -1.89
CLK1-208ENST00000464454 PRR5LQ6MZQ0 368 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 LEG1Q6P5S2 330 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 REG3GQ6UW15 175 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 ARSKQ6UWY0 536 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 HIPK1Q86Z02 1210 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.23□□□□□ -1.89
CLK1-208ENST00000464454 TBCKQ8TEA7 893 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 ITLN1Q8WWA0 313 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 RAB3CQ96E17 227 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 DCAF13Q9NV06 445 aaKnown RBP3.23□□□□□ -1.89
CLK1-208ENST00000464454 AURKCQ9UQB9 309 aa3.23□□□□□ -1.89
CLK1-208ENST00000464454 GRIN2DO15399 1336 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 IGHV3OR16-12A0A075B7B8 117 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZNF487B1APH4 448 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 C11orf98E9PRG8 122 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 IMPA2O14732 288 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ALOX15BO15296 676 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 LRRTM2O43300 516 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 BCL2L11O43521 198 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SDC3O75056 442 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SRSF10O75494 262 aaKnown RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 HPP00738 406 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ANXA4P09525 319 aaPredicted RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 DESP17661 470 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 TSPAN8P19075 237 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 DPP4P27487 766 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 AXLP30530 894 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 NOVP48745 357 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 METAP1P53582 386 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 POLR2FP61218 127 aaKnown RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 PRKCEQ02156 737 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZP4Q12836 540 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 C15orf32Q32M92 178 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SLC25A30Q5SVS4 291 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZNF562Q6V9R5 426 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ADAMTSL5Q6ZMM2 481 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 MARCH9Q86YJ5 346 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 CCDC36Q8IYA8 594 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SUMF1Q8NBK3 374 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SELENOMQ8WWX9 145 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 CRYGNQ8WXF5 182 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 MCHR2Q969V1 340 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 CARD6Q9BX69 1037 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 CCSER1Q9C0I3 900 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZBP1Q9H171 429 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 DPH5Q9H2P9 285 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 KAT8Q9H7Z6 458 aaKnown RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 TRPV5Q9NQA5 729 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 DUS2Q9NX74 493 aaKnown RBP3.22□□□□□ -1.89
CLK1-208ENST00000464454 ZNF581Q9P0T4 197 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 SENP1Q9P0U3 644 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 FOXJ3Q9UPW0 622 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 CHMP2BQ9UQN3 213 aa3.22□□□□□ -1.89
CLK1-208ENST00000464454 A0A087WZY1 265 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 TRBV7-9A0A0J9YWB2 115 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 RNF222A6NCQ9 220 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 FBLL1A6NHQ2 334 aaKnown RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 WASH3PC4AMC7 463 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 E9PAM4 449 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 H0YL77 283 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.21□□□□□ -1.9
CLK1-208ENST00000464454 CLDN3O15551 220 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 IGHV3-9P01782 118 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 IGHG3P01860 377 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 CA3P07451 260 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 FAM200BP0CF97 657 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 GSTT2P0CG29 244 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 GSTT2BP0CG30 244 aa3.21□□□□□ -1.9
CLK1-208ENST00000464454 FOLR2P14207 255 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms