RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MAP3K3Q99759 626 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 M0R3G1 203 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 SYT5O00445 386 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FAAHO00519 579 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FGF17O60258 216 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FAM20BO75063 409 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 LDB3O75112 727 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 SEMA7AO75326 666 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ATP1B1P05026 303 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ELAVL4P26378 380 aaKnown RBP20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ZP2Q05996 745 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 PRTGQ2VWP7 1150 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 NIPAL1Q6NVV3 410 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 AQP11Q8NBQ7 271 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 TMEM52Q8NDY8 209 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 SIGLEC11Q96RL6 698 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 WFDC6Q9BQY6 131 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 TRIM45Q9H8W5 580 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FBXO8Q9NRD0 319 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 PLCXD1Q9NUJ7 323 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 C19orf53Q9UNZ5 99 aaPredicted RBP20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 A0A087WV62 115 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 TRBV4-1A0A0J9YWV2 114 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 SGK494L7N484 410 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 M0R3H8 397 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 EPPINO95925 133 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 BCKDHBP21953 392 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 CXCL12P48061 93 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ID2Q02363 134 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 CHRNEQ04844 493 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FHL5Q5TD97 284 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FAM92BQ6ZTR7 304 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 COMTD1Q86VU5 262 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ENTHD1Q8IYW4 607 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 FAM210AQ96ND0 272 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 ACOT13Q9NPJ3 140 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 AKIP1Q9NQ31 210 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 A4GNTQ9UNA3 340 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 MGAT4BQ9UQ53 548 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 CLCA2Q9UQC9 943 aa20.34■□□□□ 0.85
PDLIM2-216ENST00000464275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 CLDN24A6NM45 220 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 ADAP00813 363 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 GASTP01350 101 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 NDUFA9Q16795 377 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 DEFB133Q30KQ1 61 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 ZNF311Q5JNZ3 666 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 UBE2UQ5VVX9 321 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 LAIR1Q6GTX8 287 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 SLC16A11Q8NCK7 471 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 DNASE2BQ8WZ79 361 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 GTPBP3Q969Y2 492 aaKnown RBP20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 AASSQ9UDR5 926 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 RNF6Q9Y252 685 aa20.33■□□□□ 0.84
PDLIM2-216ENST00000464275 RDH16O75452 317 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 UGT2B17O75795 530 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 MT-ND2P03891 347 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 NT5EP21589 574 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 SOX18P35713 384 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 OPRL1P41146 370 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 SKP1P63208 163 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 C14orf28Q4W4Y0 310 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 Q6ZPB1 254 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 SLCO6A1Q86UG4 719 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 IGFN1Q86VF2 1251 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 DEPDC4Q8N2C3 294 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 TMCO5AQ8N6Q1 288 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 OR9A4Q8NGU2 314 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 ZNF675Q8TD23 568 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CDS1Q92903 461 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 GUCD1Q96NT3 240 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CHCHD3Q9NX63 227 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CORINQ9Y5Q5 1042 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 FAM227AF5H4B4 570 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 K7ESF4 209 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 PCDHGA12O60330 932 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 PLOD3O60568 738 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CTSBP07858 339 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 POU2F1P14859 743 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CD97P48960 835 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CSNK1EP49674 416 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 MLLT10P55197 1068 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 ARHGAP11BQ3KRB8 267 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 TRMT12Q53H54 448 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 KLHL17Q6TDP4 642 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 WDR53Q7Z5U6 358 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 NR4A3Q92570 626 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 SLC9A6Q92581 669 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 PRRC1Q96M27 445 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 ARHGDIGQ99819 225 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 FUZQ9BT04 418 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 FNDC11Q9BVV2 318 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 RASSF1Q9NS23 344 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 SLC13A4Q9UKG4 626 aa20.32■□□□□ 0.84
PDLIM2-216ENST00000464275 CHST10O43529 356 aa20.31■□□□□ 0.84
PDLIM2-216ENST00000464275 WBP4O75554 376 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-216ENST00000464275 PIAS2O75928 621 aa20.31■□□□□ 0.84
PDLIM2-216ENST00000464275 ACP2P11117 423 aa20.31■□□□□ 0.84
PDLIM2-216ENST00000464275 KRT20P35900 424 aa20.31■□□□□ 0.84
PDLIM2-216ENST00000464275 MASP1P48740 699 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms