RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RARRES3Q9UL19 164 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PACSIN2Q9UNF0 486 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 C15orf41Q9Y2V0 281 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TTC26A0AVF1 554 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 METTL21EPA6NDL7 271 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CASTOR2A6NHX0 329 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 MPTX1A8MV57 137 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 WASH3PC4AMC7 463 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 F8VVB4 439 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 F8VWA3 439 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 EEF2KO00418 725 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ABCD4O14678 606 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RRP8O43159 456 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RNF13O43567 381 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RANBP6O60518 1105 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 SDC3O75056 442 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 SYNGR4O95473 234 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 IGHV3-13P01766 116 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CRYGCP07315 174 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 FHP07954 510 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF44P15621 663 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 GOT1P17174 413 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CYP3A5P20815 502 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 STARP49675 285 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CRYBB1P53674 252 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 MAZP56270 477 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CLDN8P56748 225 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 MAT1AQ00266 395 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 SULT2A1Q06520 285 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 PAX8Q06710 450 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ENPEPQ07075 957 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RASGEF1BQ0VAM2 473 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ILF2Q12905 390 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CDH18Q13634 790 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 BTG3Q14201 252 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 P2RY14Q15391 338 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CAMK4Q16566 473 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RBBP7Q16576 425 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 STX1AQ16623 288 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 EXOC3L2Q2M3D2 409 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 KLHL40Q2TBA0 621 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ITPRIPL2Q3MIP1 535 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 HIKESHIQ53FT3 197 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 AGBL2Q5U5Z8 902 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 NKAIN2Q5VXU1 208 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 NIPAL3Q6P499 406 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 LRRC8BQ6P9F7 803 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CD164L2Q6UWJ8 174 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 Q6ZR54 194 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 BZW1Q7L1Q6 419 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 COMTD1Q86VU5 262 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM139Q8IV31 216 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 VSTM4Q8IW00 320 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CD302Q8IX05 232 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 KATNAL2Q8IYT4 538 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ANKFN1Q8N957 763 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 Q8NBF4 154 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF397Q8NF99 534 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 OR5D13Q8NGL4 314 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 C17orf50Q8WW18 174 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 MRPL53Q96EL3 112 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 THOC1Q96FV9 657 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RPRD1AQ96P16 312 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CASD1Q96PB1 797 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 PRMT1Q99873 361 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 CBWD1Q9BRT8 395 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 DDX28Q9NUL7 540 aaKnown RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 SPHK1Q9NYA1 384 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 PDP1Q9P0J1 537 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RNF14Q9UBS8 474 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 PISDQ9UG56 409 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 NARFQ9UHQ1 456 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 IFT52Q9Y366 437 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 TMED7Q9Y3B3 224 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 TMED3Q9Y3Q3 217 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 RNF115Q9Y4L5 304 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 NME7Q9Y5B8 376 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 ZMYM6O95789 1325 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 IL16Q14005 1332 aa3.39□□□□□ -1.87
ITGB1-208ENST00000464001 IGLV3-10A0A075B6K4 115 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TRAV24A0A0B4J272 114 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 A0A1W2PPR1 153 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 HEATR9A2RTY3 570 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM150CB9EJG8 249 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ARPC3O15145 178 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CDH16O75309 829 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 WBP4O75554 376 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 RPS6KA5O75582 802 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 GNA14O95837 355 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 HAPLN1P10915 354 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PNMTP11086 282 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 HPGDP15428 266 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 UCP1P25874 307 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 U2AF2P26368 475 aaKnown RBP eCLIP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CD1BP29016 333 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 NMT1P30419 496 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms