RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	OR14L1P	Q8NHC6	308 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	WFIKKN1	Q96NZ8	548 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	HS3ST6	Q96QI5	342 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	BRINP2	Q9C0B6	783 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	ANKRA2	Q9H9E1	313 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	PRM3	Q9NNZ6	103 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	TAS2R10	Q9NYW0	307 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	KLRF1	Q9NZS2	232 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	CPSF2	Q9P2I0	782 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	HEY2	Q9UBP5	337 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	DLGAP4	Q9Y2H0	992 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	TNPO3	Q9Y5L0	923 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	ARID1A	O14497	2285 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	TLN2	Q9Y4G6	2542 aa		10.1	□□□□□ -0.79
PTPN7-204	ENST00000462815	COL6A5	A8TX70	2615 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	STX16-NPEPL1	H3BU86	382 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	STX16	O14662	325 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	MSTN	O14793	375 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	NME6	O75414	186 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	KRT15	P19012	456 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	CRYGS	P22914	178 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	CHM	P24386	653 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	MC3R	P41968	323 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	KIR2DL2	P43627	348 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	MAPK12	P53778	367 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	PLTP	P55058	493 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	CORO7	P57737	925 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	SRY	Q05066	204 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	C2orf54	Q08AI8	447 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	GAB1	Q13480	694 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	CCNYL2	Q5T2Q4	361 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	C10orf62	Q5T681	223 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	LETMD1	Q6P1Q0	360 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	ENPP6	Q6UWR7	440 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	PRSS57	Q6UWY2	283 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	TMEM151A	Q8N4L1	468 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	OR4F6	Q8NGB9	312 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	RDH11	Q8TC12	318 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZNF675	Q8TD23	568 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	TMBIM1	Q969X1	311 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	VSTM2L	Q96N03	204 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	COL21A1	Q96P44	957 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	PIGQ	Q9BRB3	760 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	BCAP29	Q9UHQ4	241 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	CFL2	Q9Y281	166 aa		10.09	□□□□□ -0.79
PTPN7-204	ENST00000462815	ATR	Q13535	2644 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	GOLGA6L10	A6NI86	522 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815		H7C1Q1	480 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	ERAL1	O75616	437 aa	Known RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	PDYN	P01213	254 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CRH	P06850	196 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CSNK2A2	P19784	350 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CPA2	P48052	419 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CCNG1	P51959	295 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CKAP4	Q07065	602 aa	Known RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	CAPRIN1	Q14444	709 aa	Known RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	BCL2A1	Q16548	175 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	PAGE2	Q7Z2X7	111 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	BTLA	Q7Z6A9	289 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	FADS6	Q8N9I5	356 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	LRRN4CL	Q8ND94	238 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	ZNF483	Q8TF39	744 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	NUDT8	Q8WV74	236 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	KLHL29	Q96CT2	875 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	PHF21B	Q96EK2	531 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	C11orf24	Q96F05	449 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815		Q96MF0	132 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	C1QTNF3	Q9BXJ4	246 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	FUT8	Q9BYC5	575 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	RTN4R	Q9BZR6	473 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	ACBD3	Q9H3P7	528 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	ZDHHC18	Q9NUE0	388 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	KLHL28	Q9NXS3	571 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	XPR1	Q9UBH6	696 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	TRPS1	Q9UHF7	1281 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	ADAM21	Q9UKJ8	722 aa		10.08	□□□□□ -0.8
PTPN7-204	ENST00000462815	STAB1	Q9NY15	2570 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	TRIM64	A6NGJ6	449 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	TRIM64B	A6NI03	449 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	FAM171A2	A8MVW0	826 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815		H0YC42	278 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	SMPD2	O60906	423 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	ABCB7	O75027	752 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	GRK2	P25098	689 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	UGT2B10	P36537	528 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	CPOX	P36551	454 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	CD79B	P40259	229 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	SERPINB8	P50452	374 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	SUCLG1	P53597	346 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	DIO3	P55073	304 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	TPD52	P55327	224 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	TRA2B	P62995	288 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	EEF1A1	P68104	462 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	RAE1	P78406	368 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	CAV1	Q03135	178 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	KRTAP1-1	Q07627	177 aa		10.07	□□□□□ -0.8
PTPN7-204	ENST00000462815	ACKR1	Q16570	336 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms