RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CLCQ05315 142 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 ACSM2AQ08AH3 577 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 FOXF2Q12947 444 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 CSTF3Q12996 717 aaKnown RBP13.98□□□□□ -0.17
SKA3-204ENST00000462482 HEPACAMQ14CZ8 416 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 POU4F3Q15319 338 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 LTB4RQ15722 352 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 ACSM2BQ68CK6 577 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.17
SKA3-204ENST00000462482 RPS27LQ71UM5 84 aaKnown RBP13.98□□□□□ -0.17
SKA3-204ENST00000462482 CCDC116Q8IYX3 515 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 GCNT2Q8N0V5 402 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 CDYL2Q8N8U2 506 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 WDSUB1Q8N9V3 476 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 ZNF675Q8TD23 568 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 EXOSC8Q96B26 276 aaKnown RBP13.98□□□□□ -0.17
SKA3-204ENST00000462482 SLC35A4Q96G79 324 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 BTBD9Q96Q07 612 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 UCN2Q96RP3 112 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 HBEGFQ99075 208 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 FUT8Q9BYC5 575 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 SHCBP1LQ9BZQ2 653 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 BEX4Q9NWD9 120 aaPredicted RBP13.98□□□□□ -0.17
SKA3-204ENST00000462482 ZNF180Q9UJW8 692 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 DLGAP4Q9Y2H0 992 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 OR10H1Q9Y4A9 318 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 A0A087WUV0 522 aaPredicted RBP13.97□□□□□ -0.17
SKA3-204ENST00000462482 PLOD2O00469 737 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 ARHGEF9O43307 516 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 PCDH7O60245 1069 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 IL3P08700 152 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 SNRPAP09012 282 aaKnown RBP13.97□□□□□ -0.17
SKA3-204ENST00000462482 MPIP34949 423 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 CPOXP36551 454 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 STARP49675 285 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 PNLIPRP2P54317 469 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 EEFSECP57772 596 aaKnown RBP13.97□□□□□ -0.17
SKA3-204ENST00000462482 SPIN4Q56A73 249 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 ZNF628Q5EBL2 1059 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 OR2A2Q6IF42 318 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 FAM180BQ6P0A1 224 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 GPRIN3Q6ZVF9 776 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 BIVMQ86UB2 503 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 FAM9CQ8IZT9 166 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 METTL6Q8TCB7 284 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 SMPDL3BQ92485 455 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 MTBPQ96DY7 904 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 ZNF681Q96N22 645 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 BBS4Q96RK4 519 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 FMO2Q99518 471 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 C1QTNF3Q9BXJ4 246 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
SKA3-204ENST00000462482 PLEKHF2Q9H8W4 249 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 TAS2R9Q9NYW1 312 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 MRPS18CQ9Y3D5 142 aaKnown RBP13.97□□□□□ -0.17
SKA3-204ENST00000462482 ITPR3Q14573 2671 aa13.97□□□□□ -0.17
SKA3-204ENST00000462482 PPP6CO00743 305 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 COQ9O75208 318 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 SMNDC1O75940 238 aaKnown RBP eCLIP13.96□□□□□ -0.17
SKA3-204ENST00000462482 HRGP04196 525 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 CRHP06850 196 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 GRK2P25098 689 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 DPP4P27487 766 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 ADSLP30566 484 aaPredicted RBP13.96□□□□□ -0.17
SKA3-204ENST00000462482 SOX18P35713 384 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 HSD17B3P37058 310 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 CLK3P49761 638 aaKnown RBP13.96□□□□□ -0.17
SKA3-204ENST00000462482 LHX2P50458 406 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 GFRA1P56159 465 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 DUSP2Q05923 314 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 BCL2A1Q16548 175 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 ADGRE4PQ86SQ3 457 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 MEIOBQ8N635 442 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 SIMC1Q8NDZ2 872 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 OR9A2Q8NGT5 310 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 KAT2AQ92830 837 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 GSX1Q9H4S2 264 aaPredicted RBP13.96□□□□□ -0.17
SKA3-204ENST00000462482 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 PPP4R1LQ9P1A2 415 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 CLCF1Q9UBD9 225 aa13.96□□□□□ -0.17
SKA3-204ENST00000462482 RPH3AQ9Y2J0 694 aaPredicted RBP13.96□□□□□ -0.17
SKA3-204ENST00000462482 A0A1B0GTL3 188 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 EXOC1LA0A1B0GW35 172 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 SLC22A20A6NK97 555 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 A8MXE2 369 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 MSTNO14793 375 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 URI1O94763 535 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 PEPDP12955 493 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 HOXB4P17483 251 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 TCEA1P23193 301 aaKnown RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 GSTM5P46439 218 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 DSCR4P56555 118 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 CORO7P57737 925 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
SKA3-204ENST00000462482 WHAMMP3Q1A5X7 153 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 SHEQ5VZ18 495 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 OR5M10Q6IEU7 315 aa13.95□□□□□ -0.18
SKA3-204ENST00000462482 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms