RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 SYBUQ9NX95 663 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 ZDHHC2Q9UIJ5 367 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 KLHDC2Q9Y2U9 406 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 AMDHD2Q9Y303 409 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 YTHDC2Q9H6S0 1430 aaKnown RBP6.55□□□□□ -1.36
LRCH3-210ENST00000461674 BRD4O60885 1362 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-210ENST00000461674 INSRP06213 1382 aa6.55□□□□□ -1.36
LRCH3-210ENST00000461674 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 WASHC1A8K0Z3 465 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 H0YL77 283 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 LSM1O15116 133 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TSPAN2O60636 221 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 RFPL2O75678 378 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 H6PDO95479 791 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CST1P01037 141 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 OPN1LWP04000 364 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 GSTT2P0CG29 244 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 GSTT2BP0CG30 244 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CCNB1P14635 433 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 NAGAP17050 411 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CASP14P31944 242 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 HTR5AP47898 357 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 AVPR1BP47901 424 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 ZP1P60852 638 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TPM4P67936 248 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 OTUD4Q01804 1114 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 SLC20A2Q08357 652 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 COTL1Q14019 142 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 AANATQ16613 207 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 ZNF699Q32M78 642 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 SBK1Q52WX2 424 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TMEM35AQ53FP2 167 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 PDZK1Q5T2W1 519 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 PRAMEF17Q5VTA0 474 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 MLIPQ5VWP3 458 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 OR4F3Q6IEY1 312 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 GLCCI1Q86VQ1 547 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 ASCC1Q8N9N2 400 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TRPV1Q8NER1 839 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 OR4D5Q8NGN0 318 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 IL17DQ8TAD2 202 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 RDH11Q8TC12 318 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TMEM174Q8WUU8 243 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 C17orf50Q8WW18 174 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 PIK3R3Q92569 461 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 LHX4Q969G2 390 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 SLC35C1Q96A29 364 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 PELI1Q96FA3 418 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CDCA3Q99618 268 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 LLPHQ9BRT6 129 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 URM1Q9BTM9 101 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 TSSK1BQ9BXA7 367 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 NARFLQ9H6Q4 476 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 AHSPQ9NZD4 102 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 FLRT3Q9NZU0 649 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 GNG12Q9UBI6 72 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 VANGL2Q9ULK5 521 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 RHBDD3Q9Y3P4 386 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CPDO75976 1380 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 PLEKHH1Q9ULM0 1364 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 COL14A1Q05707 1796 aaKnown RBP6.54□□□□□ -1.36
LRCH3-210ENST00000461674 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
LRCH3-210ENST00000461674 ZCWPW2A0A1B0GU75 182 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 A0A1W2PPV4 95 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 hDV102S1A0JD36 115 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SH3PXD2BA1X283 911 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 MANSC4A6NHS7 340 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-210ENST00000461674 CD8B2A6NJW9 211 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 C12orf71A8MTZ7 269 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 PDLIM1O00151 329 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 MLNRO43193 412 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 CABYRO75952 493 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 MBP02144 154 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 MT-ND2P03891 347 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SLC35G4P0C7Q5 338 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 FAM106CPP0CH98 169 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 UMPSP11172 480 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 GM2AP17900 193 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 CSTF2P33240 577 aaKnown RBP eCLIP6.53□□□□□ -1.363e-7■■■■□ 20.5
LRCH3-210ENST00000461674 RORAP35398 523 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 HTR2BP41595 481 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 NDST1P52848 882 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SEC61A1P61619 476 aaKnown RBP6.53□□□□□ -1.36
LRCH3-210ENST00000461674 YWHAEP62258 255 aaKnown RBP6.53□□□□□ -1.36
LRCH3-210ENST00000461674 CSNK2BP67870 215 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SRYQ05066 204 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 CCDC173Q0VFZ6 552 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SLAQ13239 276 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 ZNF234Q14588 700 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 ZNF169Q14929 603 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-210ENST00000461674 STK38Q15208 465 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 MICBQ29980 383 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 ZNF829Q3KNS6 432 aaPredicted RBP6.53□□□□□ -1.36
LRCH3-210ENST00000461674 GPR33Q49SQ1 333 aa6.53□□□□□ -1.36
LRCH3-210ENST00000461674 SFT2D3Q587I9 215 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms