RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■■□□□ 12.4
HCFC1-204ENST00000461098 EFCAB8A8MWE9 144 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 CXorf49A8MYA2 514 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-204ENST00000461098 TSPAN2O60636 221 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ATP1B1P05026 303 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 CTAGE8P0CG41 777 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 MTHFD2P13995 350 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 EPB42P16452 691 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 GRK2P25098 689 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 NEK2P51955 445 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-204ENST00000461098 CLDN20P56880 219 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 SRSF2Q01130 221 aaKnown RBP10.63□□□□□ -0.71
HCFC1-204ENST00000461098 OCRLQ01968 901 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ZNF844Q08AG5 666 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 PON3Q15166 354 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 LIPJQ5W064 366 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 CHMP1BQ7LBR1 199 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 NUDT13Q86X67 352 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 CTAGE4Q8IX94 777 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 FADS6Q8N9I5 356 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ADCY4Q8NFM4 1077 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 OR52R1Q8NGF1 315 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 NEUROG1Q92886 237 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 EXT2Q93063 718 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 REPS1Q96D71 796 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 TMCO6Q96DC7 493 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 TRMT61AQ96FX7 289 aaKnown RBP10.63□□□□□ -0.71
HCFC1-204ENST00000461098 PBKQ96KB5 322 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 COL21A1Q96P44 957 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 C19orf24Q9BVV8 132 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ALG9Q9H6U8 611 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 PRM3Q9NNZ6 103 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 OPTCQ9UBM4 332 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ASIC3Q9UHC3 531 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 BCAP29Q9UHQ4 241 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 DKKL1Q9UK85 242 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 LIPT1Q9Y234 373 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 GPR55Q9Y2T6 319 aaPredicted RBP10.63□□□□□ -0.71
HCFC1-204ENST00000461098 ZNF175Q9Y473 711 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 PCDHGA11Q9Y5H2 935 aa10.63□□□□□ -0.71
HCFC1-204ENST00000461098 UBXN8O00124 270 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
HCFC1-204ENST00000461098 FOXE1O00358 373 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-204ENST00000461098 NME6O75414 186 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-204ENST00000461098 CT45A8P0DMV1 189 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 CT45A9P0DMV2 189 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 IL11P20809 199 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 SLC6A8P48029 635 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 SLC12A2P55011 1212 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 GPX6P59796 221 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 FGFBP1Q14512 234 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 MORF4L2Q15014 288 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 PGGHGQ32M88 737 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 CT45A2Q5DJT8 189 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.62□□□□□ -0.71
HCFC1-204ENST00000461098 WFDC8Q8IUA0 241 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 TEX9Q8N6V9 391 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 FBXO36Q8NEA4 188 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 OR5M1Q8NGP8 315 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 ADOQ96SZ5 270 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 GPR22Q99680 433 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 LRRC1Q9BTT6 524 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 RTN4RQ9BZR6 473 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 BRINP2Q9C0B6 783 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 ANKRA2Q9H9E1 313 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 NUDT4Q9NZJ9 180 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 WHRNQ9P202 907 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
HCFC1-204ENST00000461098 CDC42EP3Q9UKI2 254 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 CFL2Q9Y281 166 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 MEGF8Q7Z7M0 2845 aa10.62□□□□□ -0.71
HCFC1-204ENST00000461098 E7ESA3 106 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 SEC14L5O43304 696 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 REM1O75628 298 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 CD8AP01732 235 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 S100BP04271 92 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 PCSK2P16519 638 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 THBS2P35442 1172 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 FEN1P39748 380 aaKnown RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 CORO7P57737 925 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 LTB4RQ15722 352 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 CPSF6Q16630 551 aaKnown RBP eCLIP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 FAM180BQ6P0A1 224 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 SLC48A1Q6P1K1 146 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 DNAJC14Q6Y2X3 702 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 ATG4DQ86TL0 474 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 MYLK4Q86YV6 388 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 METTL25Q8N6Q8 603 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 OR2M3Q8NG83 312 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 OR6K3Q8NGY3 331 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 STAG3L4Q8TBR4 150 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 ACTRT1Q8TDG2 376 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 SMAP2Q8WU79 429 aaPredicted RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 ZNF681Q96N22 645 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 BTBD9Q96Q07 612 aa10.61□□□□□ -0.71
HCFC1-204ENST00000461098 DDX47Q9H0S4 455 aaKnown RBP10.61□□□□□ -0.71
HCFC1-204ENST00000461098 TMEM160Q9NX00 188 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms