RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RCAN2Q14206 197 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
HDLBP-229ENST00000460826 NTRK2Q16620 822 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 MAPKAPK3Q16644 382 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 METTL21CQ5VZV1 264 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 BLOC1S3Q6QNY0 202 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 RTL4Q6ZR62 310 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 GK5Q6ZS86 529 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 GALNTL5Q7Z4T8 443 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
HDLBP-229ENST00000460826 SLC16A11Q8NCK7 471 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 PSD4Q8NDX1 1056 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 OR10G3Q8NGC4 313 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 OR56A1Q8NGH5 318 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 GOT1L1Q8NHS2 421 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-229ENST00000460826 TMBIM1Q969X1 311 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 C5orf34Q96MH7 638 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 EPN3Q9H201 632 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 SERHL2Q9H4I8 314 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 SLC6A13Q9NSD5 602 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 DEPPQ9NTK1 212 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 PCDHGB4Q9UN71 923 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 NTNG1Q9Y2I2 539 aa12.89□□□□□ -0.35
HDLBP-229ENST00000460826 PCNX3Q9H6A9 2034 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 ZNF407Q9C0G0 2248 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 B8ZZF3 427 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 G3V3Y1 287 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 PPM1BO75688 479 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 NKX2-2O95096 273 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 CD46P15529 392 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 UQCRC2P22695 453 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 MLLT10P55197 1068 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 RPS26P62854 115 aaKnown RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 IRX1P78414 480 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 UBAP2LQ14157 1087 aaKnown RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 DUSP5Q16690 384 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 VPS26BQ4G0F5 336 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 SLC2A7Q6PXP3 512 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 MSANTD1Q6ZTZ1 278 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 C6orf120Q7Z4R8 191 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 SPATA21Q7Z572 469 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 CISD2Q8N5K1 135 aaKnown RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 HORMAD2Q8N7B1 307 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 CDRT4Q8N9R6 151 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 FAM13CQ8NE31 585 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 PIK3R3Q92569 461 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 SLC9A6Q92581 669 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 GTF2H4Q92759 462 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 HGDQ93099 445 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 SAR1AQ9NR31 198 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 CHCHD2Q9Y6H1 151 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-229ENST00000460826 DNAJC13O75165 2243 aa12.88□□□□□ -0.35
HDLBP-229ENST00000460826 PINLYPA6NC86 204 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 CCDC154A6NI56 674 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 TSPAN2O60636 221 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 UGT2B11O75310 529 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 REM1O75628 298 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 IGKV1D-16P01601 117 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PTPN6P29350 595 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 GABRA3P34903 492 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 MAN2A2P49641 1150 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PRIM2P49643 509 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 CASP9P55211 416 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 KCNK10P57789 538 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 GPR85P60893 370 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 ZNHIT3Q15649 155 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PAGE3Q5JUK9 113 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 SAXO2Q658L1 398 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 BICRALQ6AI39 1079 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 RPUSD3Q6P087 351 aaKnown RBP12.87□□□□□ -0.35
HDLBP-229ENST00000460826 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 BCORP1Q8N888 145 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 GOLM1Q8NBJ4 401 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 TMEM178AQ8NBL3 297 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 GPR151Q8TDV0 419 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PAQR8Q8TEZ7 354 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 JADE3Q92613 823 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 TMEM125Q96AQ2 219 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 EFHD2Q96C19 240 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-229ENST00000460826 SLC35A4Q96G79 324 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 SGCZQ96LD1 299 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 NODALQ96S42 347 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 SLC35A5Q9BS91 424 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 ACTRT3Q9BYD9 372 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 Q9N2J8 555 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 TIMMDC1Q9NPL8 285 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 CNOT11Q9UKZ1 510 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms