RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GOLGA7Q7Z5G4 137 aa2.56□□□□□ -2
HPS3-203ENST00000460822 GPBP1Q86WP2 473 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CBWD2Q8IUF1 395 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ITPRIPQ8IWB1 547 aa2.56□□□□□ -2
HPS3-203ENST00000460822 UBQLNLQ8IYU4 475 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SLC22A15Q8IZD6 547 aa2.56□□□□□ -2
HPS3-203ENST00000460822 LINC00518Q8N0U6 118 aa2.56□□□□□ -2
HPS3-203ENST00000460822 DCLK2Q8N568 766 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CNBD1Q8NA66 436 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TMEM178AQ8NBL3 297 aa2.56□□□□□ -2
HPS3-203ENST00000460822 OR10G8Q8NGN5 311 aa2.56□□□□□ -2
HPS3-203ENST00000460822 WDR36Q8NI36 951 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 LMO3Q8TAP4 145 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RDH11Q8TC12 318 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ATP8B4Q8TF62 1192 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SMAP2Q8WU79 429 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 LIPHQ8WWY8 451 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PIBF1Q8WXW3 757 aa2.56□□□□□ -2
HPS3-203ENST00000460822 DHTKD1Q96HY7 919 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
HPS3-203ENST00000460822 UHRF2Q96PU4 802 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PAPOLGQ9BWT3 736 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 KAT8Q9H7Z6 458 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 AGPAT5Q9NUQ2 364 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RNF14Q9UBS8 474 aa2.56□□□□□ -2
HPS3-203ENST00000460822 NIP7Q9Y221 180 aaKnown RBP eCLIP2.56□□□□□ -2
HPS3-203ENST00000460822 OR10H1Q9Y4A9 318 aa2.56□□□□□ -2
HPS3-203ENST00000460822 KLF2Q9Y5W3 355 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 MYOM2P54296 1465 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SETBP1Q9Y6X0 1596 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PPLO60437 1756 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TTC41PQ6P2S7 1318 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PTPRTO14522 1441 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PPIP5K1Q6PFW1 1433 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CD109Q6YHK3 1445 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ARHGAP5Q13017 1502 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ARHGEF28Q8N1W1 1705 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 KIF20BQ96Q89 1820 aa2.56□□□□□ -2
HPS3-203ENST00000460822 MSGN1A6NI15 193 aa2.56□□□□□ -2
HPS3-203ENST00000460822 NPIPA2E9PIF3 369 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PPIAL4DF5H284 164 aa2.56□□□□□ -2
HPS3-203ENST00000460822 H0YIV9 168 aa2.56□□□□□ -2
HPS3-203ENST00000460822 SURF4O15260 269 aa2.56□□□□□ -2
HPS3-203ENST00000460822 BUB1O43683 1085 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ANGPTL1O95841 491 aa2.56□□□□□ -2
HPS3-203ENST00000460822 PAK4O96013 591 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 GOT2P00505 430 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 IGHEP01854 428 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CHRNA1P02708 482 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RPLP0P05388 317 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 ANXA4P09525 319 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 HNF1AP20823 631 aa2.56□□□□□ -2
HPS3-203ENST00000460822 LEPRP48357 1165 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 RPL27P61353 136 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 RPL36AP83881 106 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 GUCY2DQ02846 1103 aa2.56□□□□□ -2
HPS3-203ENST00000460822 HYAL1Q12794 435 aa2.56□□□□□ -2
HPS3-203ENST00000460822 EXOSC2Q13868 293 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 EFTUD2Q15029 972 aaKnown RBP eCLIP2.56□□□□□ -2
HPS3-203ENST00000460822 PPP1R7Q15435 360 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF699Q32M78 642 aa2.56□□□□□ -2
HPS3-203ENST00000460822 KIAA1644Q3SXP7 199 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RFTN2Q52LD8 501 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 TCHHL1Q5QJ38 904 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 C1orf185Q5T7R7 199 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ATF7IP2Q5U623 682 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TAF3Q5VWG9 929 aa2.56□□□□□ -2
HPS3-203ENST00000460822 STEAP1BQ6NZ63 245 aa2.56□□□□□ -2
HPS3-203ENST00000460822 DPY19L2P2Q6ZN68 376 aa2.56□□□□□ -2
HPS3-203ENST00000460822 Q6ZTC4 211 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF771Q7L3S4 317 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 TTC5Q8N0Z6 440 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RPLP0P6Q8NHW5 317 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNRF4Q8WWF5 429 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TCP11Q8WWU5 503 aa2.56□□□□□ -2
HPS3-203ENST00000460822 ZNF486Q96H40 463 aaPredicted RBP2.56□□□□□ -2
HPS3-203ENST00000460822 HPDLQ96IR7 371 aa2.56□□□□□ -2
HPS3-203ENST00000460822 VSTM2LQ96N03 204 aa2.56□□□□□ -2
HPS3-203ENST00000460822 CASD1Q96PB1 797 aa2.56□□□□□ -2
HPS3-203ENST00000460822 DCTN5Q9BTE1 182 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RBM24Q9BX46 236 aaKnown RBP2.56□□□□□ -2
HPS3-203ENST00000460822 GSDMCQ9BYG8 508 aa2.56□□□□□ -2
HPS3-203ENST00000460822 MAGT1Q9H0U3 335 aa2.56□□□□□ -2
HPS3-203ENST00000460822 FN3KRPQ9HA64 309 aa2.56□□□□□ -2
HPS3-203ENST00000460822 APMAPQ9HDC9 416 aa2.56□□□□□ -2
HPS3-203ENST00000460822 RAB20Q9NX57 234 aa2.56□□□□□ -2
HPS3-203ENST00000460822 TRAPPC8Q9Y2L5 1435 aa2.55□□□□□ -2
HPS3-203ENST00000460822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.55□□□□□ -2
HPS3-203ENST00000460822 VWDEQ8N2E2 1590 aa2.55□□□□□ -2
HPS3-203ENST00000460822 MRC2Q9UBG0 1479 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ARPC4-TTLL3A0A0A6YYG9 625 aa2.55□□□□□ -2
HPS3-203ENST00000460822 A0A0U1RQS6 177 aa2.55□□□□□ -2
HPS3-203ENST00000460822 MEI4A8MW99 385 aa2.55□□□□□ -2
HPS3-203ENST00000460822 E9PMD0 336 aa2.55□□□□□ -2
HPS3-203ENST00000460822 H0YL77 283 aa2.55□□□□□ -2
HPS3-203ENST00000460822 H3BMH7 237 aa2.55□□□□□ -2
HPS3-203ENST00000460822 SGK494L7N484 410 aa2.55□□□□□ -2
HPS3-203ENST00000460822 BUB3O43684 328 aa2.55□□□□□ -2
HPS3-203ENST00000460822 BCAS1O75363 584 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 NEBLO76041 1014 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms