RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 GPR19Q15760 415 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 NPTX1Q15818 432 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 SYPL1Q16563 259 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 DEFB134Q4QY38 66 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 GPAT3Q53EU6 434 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FGD3Q5JSP0 725 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 GARNL3Q5VVW2 1013 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ANKRD34AQ69YU3 496 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 Q6ZS52 159 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 C19orf47Q8N9M1 422 aaKnown RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FAM46DQ8NEK8 389 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 OR9A2Q8NGT5 310 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ORAI3Q9BRQ5 295 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FUZQ9BT04 418 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 LRRC61Q9BV99 259 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FNDC11Q9BVV2 318 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 RAB33BQ9H082 229 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ARMC7Q9H6L4 198 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 DUSP22Q9NRW4 184 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FKBP14Q9NWM8 211 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 FTSJ1Q9UET6 329 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 ENPP5Q9UJA9 477 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
ERCC3-205ENST00000460485 RNF6Q9Y252 685 aa13.22□□□□□ -0.29
ERCC3-205ENST00000460485 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SYNDIG1LA6NDD5 238 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 GLOD5A6NK44 160 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 TAF4O00268 1085 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SCAMP1O15126 338 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 P2RX6O15547 441 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 PCDHGA12O60330 932 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 GPR75O95800 540 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CHRM4P08173 479 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 TNFRSF1BP20333 461 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CAPZBP47756 277 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 ARHGAP11BQ3KRB8 267 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 EXOSC6Q5RKV6 272 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 DEF8Q6ZN54 512 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 PEX5LQ8IYB4 626 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CDRT4Q8N9R6 151 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 OR5D16Q8NGK9 328 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 ZCCHC10Q8TBK6 192 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 OIT3Q8WWZ8 545 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SLC38A4Q969I6 547 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 TCTN2Q96GX1 697 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 ZNF578Q96N58 590 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 PELOQ9BRX2 385 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CCDC90BQ9GZT6 254 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 LHPPQ9H008 270 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SLC38A1Q9H2H9 487 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 PIGUQ9H490 435 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 MTHFD2LQ9H903 347 aaPredicted RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 IL21RQ9HBE5 538 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 CLN6Q9NWW5 311 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
ERCC3-205ENST00000460485 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 ZNF232Q9UNY5 417 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 KLHL20Q9Y2M5 609 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 SNX11Q9Y5W9 270 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 DMXL2Q8TDJ6 3036 aa13.21□□□□□ -0.29
ERCC3-205ENST00000460485 TDRD6O60522 2096 aaKnown RBP13.2□□□□□ -0.3
ERCC3-205ENST00000460485 SCN3AQ9NY46 2000 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 CLCA1A8K7I4 914 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 PCDH17O14917 1159 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 B4GAT1O43505 415 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 OR10H3O60404 316 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
ERCC3-205ENST00000460485 UBXN7O94888 489 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 GABARAPO95166 117 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 CDH3P22223 829 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 ALDH4A1P30038 563 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FMO3P31513 532 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 PRKAG1P54619 331 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 EMX1Q04741 257 aaPredicted RBP13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FUT5Q11128 374 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 FAM53BQ14153 422 aa13.2□□□□□ -0.3
ERCC3-205ENST00000460485 GANABQ14697 944 aaKnown RBP13.2□□□□□ -0.3
ERCC3-205ENST00000460485 TRAM2Q15035 370 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms