RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 AGKQ53H12 422 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 CT45A2Q5DJT8 189 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 EXOSC6Q5RKV6 272 aaKnown RBP9.17□□□□□ -0.94
VPS45-204ENST00000460366 TUBA3EQ6PEY2 450 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 LYPD4Q6UWN0 246 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 PIGWQ7Z7B1 504 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 CLECL1Q8IZS7 167 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 TRIML2Q8N7C3 387 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 TEX19Q8NA77 164 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 GOLM1Q8NBJ4 401 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 MDS2Q8NDY4 140 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 SIMC1Q8NDZ2 872 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 OR4A15Q8NGL6 344 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 OR9I1Q8NGQ6 314 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 DNAJB8Q8NHS0 232 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 ASB15Q8WXK1 588 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 PNPLA2Q96AD5 504 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 SPDL1Q96EA4 605 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 GIMAP5Q96F15 307 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 MAGED4Q96JG8 741 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 GAL3ST4Q96RP7 486 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 ITPAQ9BY32 194 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 NXF5Q9H1B4 397 aaKnown RBP9.17□□□□□ -0.94
VPS45-204ENST00000460366 CXorf36Q9H7Y0 433 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 LIN28AQ9H9Z2 209 aaKnown RBP9.17□□□□□ -0.94
VPS45-204ENST00000460366 ZNF71Q9NQZ8 489 aaPredicted RBP9.17□□□□□ -0.94
VPS45-204ENST00000460366 SAR1AQ9NR31 198 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 ZCCHC3Q9NUD5 404 aaKnown RBP9.17□□□□□ -0.94
VPS45-204ENST00000460366 PLA2G3Q9NZ20 509 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 CCDC167Q9P0B6 97 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 B3GNT3Q9Y2A9 372 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 SNX8Q9Y5X2 465 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 NPFFR2Q9Y5X5 522 aa9.17□□□□□ -0.94
VPS45-204ENST00000460366 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 A0A1W2PP18 115 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 A8MVJ9 347 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 C9JVG2 144 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 RFXANKO14593 260 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 NEURL1O76050 574 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 NKX2-2O95096 273 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 CPSF4O95639 269 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 ABCB1P08183 1280 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 MSX1P28360 303 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 TMED10P49755 219 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 PRKAG1P54619 331 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 PSG6Q00889 435 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 OC90Q02509 493 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 UBAP2LQ14157 1087 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 OR1C1Q15619 314 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 NTRK2Q16620 822 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 SPDYE7PQ495Y7 208 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 ZNF468Q5VIY5 522 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 MFSD12Q6NUT3 480 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 RPUSD3Q6P087 351 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 C16orf47Q6ZP98 133 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 RTL4Q6ZR62 310 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 ANKRD46Q86W74 232 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 MIPOL1Q8TD10 442 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 GTF2H4Q92759 462 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 SPACA9Q96E40 222 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 PANX1Q96RD7 426 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 SECISBP2Q96T21 854 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 STACQ99469 402 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 ACTRT3Q9BYD9 372 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS45-204ENST00000460366 ANKRA2Q9H9E1 313 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 Q9N2J8 555 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 SERHLQ9NQF3 203 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 DUSP22Q9NRW4 184 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 HPF1Q9NWY4 346 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 LRFN1Q9P244 771 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 ANAPC2Q9UJX6 822 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 MRTO4Q9UKD2 239 aaKnown RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 VPS4AQ9UN37 437 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 FAF1Q9UNN5 650 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 DTX4Q9Y2E6 619 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 LAMA5O15230 3695 aa9.16□□□□□ -0.94
VPS45-204ENST00000460366 NUP214P35658 2090 aaPredicted RBP9.16□□□□□ -0.94
VPS45-204ENST00000460366 LOC400499M0QZD8 3231 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 A0A096LPI6 279 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 RNF103-CHMP3A0A140T963 221 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 DUXAA6NLW8 204 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 NR5A2O00482 541 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 ZNF354AO60765 605 aaPredicted RBP9.15□□□□□ -0.94
VPS45-204ENST00000460366 PPM1BO75688 479 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 OR6B1O95007 311 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 KRT75O95678 551 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 FAM107AO95990 144 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 HMGN2P05204 90 aaKnown RBP9.15□□□□□ -0.94
VPS45-204ENST00000460366 SNRPB2P08579 225 aaKnown RBP9.15□□□□□ -0.94
VPS45-204ENST00000460366 ALOX5P09917 674 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 ABCD3P28288 659 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 LCN1P31025 176 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 GABRA3P34903 492 aa9.15□□□□□ -0.94
VPS45-204ENST00000460366 SOX3P41225 446 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms