RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 UQCC2Q9BRT2 126 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 PCDHGA6Q9Y5G7 932 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 OR2A25A4D2G3 310 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 TP53P04637 393 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ITGAMP11215 1152 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CSNK2A2P19784 350 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CPN2P22792 545 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CRISP3P54108 245 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 CSNK1G2P78368 415 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 KEAP1Q14145 624 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 GPR68Q15743 365 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 TMEM52BQ4KMG9 183 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 GARNL3Q5VVW2 1013 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 VN1R5Q7Z5H4 357 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 DEFB119Q8N690 84 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ACOT4Q8N9L9 421 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ENKURQ8TC29 256 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF675Q8TD23 568 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 ARSGQ96EG1 525 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
LMNB1-203ENST00000460265 EVA1BQ9NVM1 165 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 KLHL28Q9NXS3 571 aa14.53□□□□□ -0.08
LMNB1-203ENST00000460265 OR5K3A6NET4 321 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 TYRP1P17643 537 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 TNFSF8P32971 234 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 HSD17B2P37059 387 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 MAGEA2P43356 314 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 GSTM5P46439 218 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 ANXA11P50995 505 aaKnown RBP14.52□□□□□ -0.08
LMNB1-203ENST00000460265 TGM3Q08188 693 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 RPA4Q13156 261 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 TSTQ16762 297 aaKnown RBP14.52□□□□□ -0.08
LMNB1-203ENST00000460265 ARSKQ6UWY0 536 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 ZNF730Q6ZMV8 503 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 PARGQ86W56 976 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 LINC01555Q8NAE3 123 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 ART5Q96L15 291 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 EPYCQ99645 322 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 CNPPD1Q9BV87 410 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 FGF22Q9HCT0 170 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 ATG4BQ9Y4P1 393 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 PCDHGB2Q9Y5G2 931 aa14.52□□□□□ -0.08
LMNB1-203ENST00000460265 TDRD6O60522 2096 aaKnown RBP14.52□□□□□ -0.08
LMNB1-203ENST00000460265 SMLR1H3BR10 107 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 TRIM77I1YAP6 450 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 TLR4O00206 839 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 MYL12BO14950 172 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 LILRB5O75023 590 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 ARAFP10398 606 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 RHCEP18577 417 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 ACVR2AP27037 513 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 MPIP34949 423 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 RHAGQ02094 409 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 SCN1BQ07699 218 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 QPRTQ15274 297 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 BHLHB9Q6PI77 547 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 ZNF765Q7L2R6 523 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 APOOQ9BUR5 198 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 RBCK1Q9BYM8 510 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 SLC22A4Q9H015 551 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 C3orf14Q9HBI5 128 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 SLC6A14Q9UN76 642 aa14.52□□□□□ -0.09
LMNB1-203ENST00000460265 CIB4A0PJX0 185 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 B3GALNT1O75752 331 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ADH1BP00325 375 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 CTSEP14091 401 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 NTSR1P30989 418 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GZMKP49863 264 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 CRISP1P54107 249 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 RGS8P57771 180 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ZMYND11Q15326 602 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 KIAA0907Q7Z7F0 614 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ADGRF3Q8IZF5 1079 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 IPCEF1Q8WWN9 437 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ING3Q9NXR8 418 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 H2AFY2Q9P0M6 372 aaPredicted RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 MUTYHQ9UIF7 546 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 NDRG4Q9ULP0 352 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 A3GALT2U3KPV4 340 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GBF1Q92538 1859 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ARPC4-TTLL3A0A0A6YYG9 625 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GGT2P36268 569 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 MC3RP41968 323 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 RPS5P46782 204 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 TAS2R38P59533 333 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 RGS1Q08116 209 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ZC3H12BQ5HYM0 836 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ZNF311Q5JNZ3 666 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 LAIR1Q6GTX8 287 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 TMPRSS11AQ6ZMR5 421 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 RNF165Q6ZSG1 346 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 B3GNT7Q8NFL0 401 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 OR52E4Q8NGH9 312 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 OR9A2Q8NGT5 310 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GGHQ92820 318 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 ZNF566Q969W8 418 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 TEFMQ96QE5 360 aaKnown RBP14.51□□□□□ -0.09
LMNB1-203ENST00000460265 KCNN2Q9H2S1 579 aa14.51□□□□□ -0.09
LMNB1-203ENST00000460265 GLIPR2Q9H4G4 154 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms