RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 OR10Q1Q8NGQ4 319 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 OR1J4Q8NGS1 313 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 OR2T11Q8NH01 316 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 CAVIN3Q969G5 261 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 SLC35A4Q96G79 324 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 FAM111AQ96PZ2 611 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 TUBB1Q9H4B7 451 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 LRTM1Q9HBL6 345 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 C1orf109Q9NX04 203 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 TAS2R9Q9NYW1 312 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 KLRF1Q9NZS2 232 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 Q9UFV3 132 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 FIS1Q9Y3D6 152 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 MED12Q93074 2177 aa17.28■□□□□ 0.36
COL5A1-203ENST00000460264 A0A087WV62 115 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 RGS14O43566 566 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 ABCB7O75027 752 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 COQ9O75208 318 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 SPAG7O75391 227 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 REM1O75628 298 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 SLITRK5O94991 958 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 CHRNGP07510 517 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 NEFHP12036 1026 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 TACR1P25103 407 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 NTSP30990 170 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 PSPHP78330 225 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 ZNF155Q12901 538 aaPredicted RBP17.27■□□□□ 0.36
COL5A1-203ENST00000460264 TOMM20Q15388 145 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 EGLN2Q96KS0 407 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 FCRL1Q96LA6 429 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 TIMP4Q99727 224 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 MECRQ9BV79 373 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
COL5A1-203ENST00000460264 GLIPR2Q9H4G4 154 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 ROPN1Q9HAT0 212 aaPredicted RBP17.27■□□□□ 0.36
COL5A1-203ENST00000460264 KCNJ16Q9NPI9 418 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 SLC6A5Q9Y345 797 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 DNAJC15Q9Y5T4 150 aa17.27■□□□□ 0.36
COL5A1-203ENST00000460264 KIAA1549Q9HCM3 1950 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 POLQO75417 2590 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 C2orf72A6NCS6 295 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 TMEM233B4DJY2 109 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 NPHS1O60500 1241 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 TSPAN2O60636 221 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 SLU7O95391 586 aaKnown RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 MSX1P28360 303 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 ZFP36L2P47974 494 aaKnown RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 EIPR1Q53HC9 387 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 NHSL2Q5HYW2 709 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 RIPPLY2Q5TAB7 128 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 TMEM107Q6UX40 140 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 Q6ZSR9 355 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 SLC44A2Q8IWA5 706 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 WDSUB1Q8N9V3 476 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 FAM83FQ8NEG4 500 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 TCP10LQ8TDR4 215 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 TMCO6Q96DC7 493 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 AMDHD1Q96NU7 426 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 ADOQ96SZ5 270 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 CCT7Q99832 543 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 PRDM14Q9GZV8 571 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 SERHLQ9NQF3 203 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 C19orf53Q9UNZ5 99 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 MAPRE3Q9UPY8 281 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 V9GYY5 206 aaPredicted RBP17.26■□□□□ 0.35
COL5A1-203ENST00000460264 CSMD1Q96PZ7 3565 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 OTOGQ6ZRI0 2925 aa17.26■□□□□ 0.35
COL5A1-203ENST00000460264 FAM47E-STBD1D6RA91 191 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 PLOD2O00469 737 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 PSMG1O95456 288 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 CHEK2O96017 543 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 LINC00032P0C843 101 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 SDC1P18827 310 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 IL12BP29460 328 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 SSTR2P30874 369 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 KRT20P35900 424 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 PSG6Q00889 435 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 EFR3AQ14156 821 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 ACSF3Q4G176 576 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 ARL13AQ5H913 290 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 WIPI1Q5MNZ9 446 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 DCST1Q5T197 706 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 SEM1Q6ZVN7 128 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 LARP4Q71RC2 724 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 OR2L13Q8N349 312 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 OR4N2Q8NGD1 307 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 RNF138Q8WVD3 245 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 ZNF764Q96H86 408 aaPredicted RBP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 UGT2B28Q9BY64 529 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 DDX18Q9NVP1 670 aaKnown RBP17.25■□□□□ 0.35
COL5A1-203ENST00000460264 OR10H1Q9Y4A9 318 aa17.25■□□□□ 0.35
COL5A1-203ENST00000460264 AHRRA9YTQ3 701 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 UPK1AO00322 258 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 LSM1O15116 133 aaKnown RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 ZNF500O60304 480 aaPredicted RBP17.24■□□□□ 0.35
COL5A1-203ENST00000460264 FGF4P08620 206 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 CREB1P16220 341 aa17.24■□□□□ 0.35
COL5A1-203ENST00000460264 BMP7P18075 431 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms