RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 QSOX2Q6ZRP7 698 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 PLEKHM3Q6ZWE6 761 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MBOAT2Q6ZWT7 520 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ASPGQ86U10 573 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 KLHL36Q8N4N3 616 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 C2orf73Q8N5S3 287 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 OR52L1Q8NGH7 329 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 OR52E1Q8NGJ3 308 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 OR6T1Q8NGN1 323 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ADAMTS15Q8TE58 950 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 RSC1A1Q92681 617 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 DIO2Q92813 273 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ELP4Q96EB1 424 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 RNFT2Q96EX2 444 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 LRFN5Q96NI6 719 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 OR7D2Q96RA2 312 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SERINC2Q96SA4 455 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CTRCQ99895 268 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MAN2C1Q9NTJ4 1040 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 TXNL4BQ9NX01 149 aaKnown RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 H2AFY2Q9P0M6 372 aaPredicted RBP8.31□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF221Q9UK13 617 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CES1P1Q9UKY3 287 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 SATB2Q9UPW6 733 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 BAIAP2Q9UQB8 552 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 PRKAB1Q9Y478 270 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 CDH10Q9Y6N8 788 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 MUC3AQ02505 3323 aa8.31□□□□□ -1.08
HDAC3-202ENST00000459727 A0A087WUU8 490 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 IGKV1-8A0A0C4DH67 115 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 HTR3EA5X5Y0 456 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 FAM172BPA6NC97 362 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 M0R129 80 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 PROM1O43490 865 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 PLRG1O43660 514 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 LCMT2O60294 686 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SLC19A2O60779 497 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SEMA7AO75326 666 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 CCNKO75909 580 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 DNTTP04053 509 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ASGR2P07307 311 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 GUSBP08236 651 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 HBQ1P09105 142 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 IL7P13232 177 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 NDUFV2P19404 249 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 GTF2E2P29084 291 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 TGFBR1P36897 503 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 RPS19P39019 145 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 DDOSTP39656 456 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 FEN1P39748 380 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 MAN2A2P49641 1150 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 PRKAG1P54619 331 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR2B6P58173 313 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SELENBP1Q13228 472 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 GAS6Q14393 721 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 TAB1Q15750 504 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 MLF2Q15773 248 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 RPE65Q16518 533 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 BCL2A1Q16548 175 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 PGGHGQ32M88 737 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ARHGAP11BQ3KRB8 267 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ITPRIPL2Q3MIP1 535 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 TJAP1Q5JTD0 557 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 LCN1P1Q5VSP4 162 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 NXNL2Q5VZ03 156 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ABHD13Q7L211 337 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 GDPD3Q7L5L3 318 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 AMIGO1Q86WK6 493 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 UBQLNLQ8IYU4 475 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 CAMKVQ8NCB2 501 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 FAM83FQ8NEG4 500 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR2T33Q8NG76 320 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR4K14Q8NGD5 310 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR4D11Q8NGI4 311 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR5D16Q8NGK9 328 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR8K5Q8NH50 307 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR52P1PQ8NH57 321 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 BRIX1Q8TDN6 353 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ASB15Q8WXK1 588 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 FGF11Q92914 225 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SLC35B4Q969S0 331 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 KCTD12Q96CX2 325 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 CNRIP1Q96F85 164 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 RIPOR3Q96MK2 946 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 OR2A14Q96R47 310 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SNX18Q96RF0 628 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 KCNS3Q9BQ31 491 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 LGR4Q9BXB1 951 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SRRQ9GZT4 340 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SAP130Q9H0E3 1048 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 ABCG4Q9H172 646 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 LYRM4Q9HD34 91 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SLC6A20Q9NP91 592 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 POLE4Q9NR33 117 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms