RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 KCNK9Q9NPC2 374 aa16.06■□□□□ 0.16
SCARNA2-201ENST00000458748 C19orf53Q9UNZ5 99 aaPredicted RBP16.06■□□□□ 0.16
SCARNA2-201ENST00000458748 PCDHGB3Q9Y5G1 929 aa16.06■□□□□ 0.16
SCARNA2-201ENST00000458748 PTGDR2Q9Y5Y4 395 aa16.06■□□□□ 0.16
SCARNA2-201ENST00000458748 LRRC3CA6NJW4 275 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 TBX19O60806 448 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 LRATO95237 230 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SERPINE1P05121 402 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 PRF1P14222 555 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 GABRA1P14867 456 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 CREB1P16220 341 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SDC1P18827 310 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 GRK2P25098 689 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 ACVR2AP27037 513 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 PTGER4P35408 488 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 MC3RP41968 323 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 PSMD4P55036 377 aaKnown RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 MAD2L1Q13257 205 aaPredicted RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 TOMM20Q15388 145 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SF3B4Q15427 424 aaKnown RBP eCLIP16.05■□□□□ 0.16not detected■■■□□ 15.9
SCARNA2-201ENST00000458748 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 CYP27C1Q4G0S4 372 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 RFTN2Q52LD8 501 aaPredicted RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 TMEM107Q6UX40 140 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 C3P1Q6ZMU1 363 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 EXOC3L1Q86VI1 746 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SLC44A2Q8IWA5 706 aaPredicted RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 NATD1Q8N6N6 113 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 RND1Q92730 232 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 HGDQ93099 445 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 GFM2Q969S9 779 aaKnown RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 TMBIM1Q969X1 311 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SLC35A4Q96G79 324 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 TSSK3Q96PN8 268 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 GLIPR2Q9H4G4 154 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 SH3BP4Q9P0V3 963 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 C15orf41Q9Y2V0 281 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 NINQ8N4C6 2090 aa16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 PHF3Q92576 2039 aaKnown RBP16.05■□□□□ 0.16
SCARNA2-201ENST00000458748 PRAMEF25A6NGN4 478 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 TMEM233B4DJY2 109 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 LYPLA1O75608 230 aaPredicted RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 HPNP05981 417 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 CELA3AP09093 270 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 RFPL3SP0C7P2 107 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 TACR1P25103 407 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 GRNP28799 593 aaKnown RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 SOX18P35713 384 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 PNLIPRP2P54317 469 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 MANFP55145 182 aaKnown RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 VPS26BQ4G0F5 336 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 TIGD3Q6B0B8 471 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 ZNF585AQ6P3V2 769 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 B3GNT6Q6ZMB0 384 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 LARP4Q71RC2 724 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 OR2L13Q8N349 312 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 SIMC1Q8NDZ2 872 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 CEP70Q8NHQ1 597 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 NEIL3Q8TAT5 605 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 ELP4Q96EB1 424 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 EGLN2Q96KS0 407 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 PRPF18Q99633 342 aaKnown RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 Q9N2J8 555 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 PNPLA3Q9NST1 481 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 ACSS1Q9NUB1 689 aaPredicted RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 ATAD3AQ9NVI7 634 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 EIF3LQ9Y262 564 aaKnown RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 LIPGQ9Y5X9 500 aa16.04■□□□□ 0.16
SCARNA2-201ENST00000458748 CACNA1CQ13936 2221 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 C15orf38-AP3S2A0A0A6YYH1 394 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 WDR91A4D1P6 747 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 ENO4A6NNW6 628 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 AKAP10O43572 662 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 ICOSLGO75144 302 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 PEX11AO75192 247 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 UGT2B11O75310 529 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CBR3O75828 277 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CT45A8P0DMV1 189 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CT45A9P0DMV2 189 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 PRPS2P11908 318 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 BCKDHAP12694 445 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CORO7P57737 925 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CHI3L2Q15782 390 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 DECR1Q16698 335 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 CT45A2Q5DJT8 189 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 XKR7Q5GH72 579 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 EMC4Q5J8M3 183 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 BICRALQ6AI39 1079 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 ANGPTL8Q6UXH0 198 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 PM20D2Q8IYS1 436 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 FNDC5Q8NAU1 212 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 OR5M9Q8NGP3 310 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 OR6Y1Q8NGX8 325 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 SDCCAG3Q96C92 435 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 TUBGCP3Q96CW5 907 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 ADOQ96SZ5 270 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 ANKRA2Q9H9E1 313 aa16.03■□□□□ 0.16
SCARNA2-201ENST00000458748 HHATLQ9HCP6 504 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms