RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 HS3ST2Q9Y278 367 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 NSG1A0A0A6YYJ2 146 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 RFXAPO00287 272 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF821O75541 412 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 TIMP2P16035 220 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 CHMP24386 653 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 RGS19P49795 217 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GALEQ14376 348 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 ZMYND11Q15326 602 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 OR4D1Q15615 310 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GAREM2Q75VX8 874 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 MED30Q96HR3 178 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 RNF6Q9Y252 685 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 FKBP7Q9Y680 259 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 TMEM14AQ9Y6G1 99 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 NPIPB15A6NHN6 443 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 TLR4O00206 839 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 CXCL10P02778 98 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 F11P03951 625 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GRIK2Q13002 908 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GRB7Q14451 532 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 CDKN3Q16667 212 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF789Q5FWF6 425 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 UBE2UQ5VVX9 321 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 HSDL2Q6YN16 418 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 SSX9Q7RTT3 188 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 NT5C3BQ969T7 300 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 TCTN2Q96GX1 697 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 SFXN2Q96NB2 322 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 CCDC86Q9H6F5 360 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 TUBG2Q9NRH3 451 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 MARCH5Q9NX47 278 aa10.18□□□□□ -0.78
AMBRA1-202ENST00000458649 A0A096LPI6 279 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF705EA8MWA4 302 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 NOBOXO60393 691 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CHRNB1P11230 501 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF35P13682 527 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 IL1RNP18510 177 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 MAP2K3P46734 347 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ETV1P50549 477 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 HSD17B7P56937 341 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CLDN2P57739 230 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 UGT3A2Q3SY77 523 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 METTL4Q8N3J2 472 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 GPR150Q8NGU9 434 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZUFSPQ96AP4 578 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 SLC39A13Q96H72 371 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 MAELQ96JY0 434 aaKnown RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF696Q9H7X3 374 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TRIM36Q9NQ86 728 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 BOKQ9UMX3 212 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ERVK-19Q9WJR5 959 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ACTL7AQ9Y615 435 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 PAPPA2Q9BXP8 1791 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ABOP16442 354 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TCN2P20062 427 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 FPR1P21462 350 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 GCAP28676 217 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TGFBR3Q03167 851 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ARFRP1Q13795 201 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 PCBP2Q15366 365 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■□□□ 14.2
AMBRA1-202ENST00000458649 BORAQ6PGQ7 559 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ERMP1Q7Z2K6 904 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 MCATQ8IVS2 390 aaKnown RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 NINJ1Q92982 152 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 L3HYPDHQ96EM0 354 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TP63Q9H3D4 680 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TAAR2Q9P1P5 351 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 PCDHGB6Q9Y5F9 930 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TEX51A0A1B0GUA7 166 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 A0A1B0GVG6 124 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 A0A1W2PPL8 197 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 GBAP04062 536 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 HRGP04196 525 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CHRM5P08912 532 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 DCKP27707 260 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 HOXD9P28356 352 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 PPP5CP53041 499 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CHAF1BQ13112 559 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 UGT8Q16880 541 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 VASH1Q7L8A9 365 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 FOXRED2Q8IWF2 684 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 BIRC7Q96CA5 298 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZNF559Q9BR84 538 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 C7orf50Q9BRJ6 194 aaKnown RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 FOLH1BQ9HBA9 442 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 ZBTB20Q9HC78 741 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CA5BQ9Y2D0 317 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 HOXC11O43248 304 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TGM6O95932 706 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 TAS2R38P59533 333 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 CTBSQ01459 385 aa10.17□□□□□ -0.78
AMBRA1-202ENST00000458649 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms