RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TRIP10Q15642 601 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 TRIP6Q15654 476 aaKnown RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 NPTX1Q15818 432 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 DUSP7Q16829 419 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ZNF630Q2M218 657 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 CRB2Q5IJ48 1285 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MFSD4BQ5TF39 518 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 YOD1Q5VVQ6 348 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 TYW3Q6IPR3 259 aaKnown RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 ERICH5Q6P6B1 374 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 FIGNL1Q6PIW4 674 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 QSOX2Q6ZRP7 698 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 EIF3MQ7L2H7 374 aaKnown RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 RAB11FIP2Q7L804 512 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ANKRD37Q7Z713 158 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 VRK2Q86Y07 508 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 GALNT12Q8IXK2 581 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 C9orf40Q8IXQ3 194 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 NFAM1Q8NET5 270 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 C16orf52Q8NHV5 167 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 SLC9A6Q92581 669 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 RIT1Q92963 219 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 RNF145Q96MT1 663 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 DGAT2Q96PD7 388 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 OR1F2PQ96R84 312 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 TREX2Q9BQ50 279 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 ACTRT3Q9BYD9 372 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 RASSF4Q9H2L5 321 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 FBXO8Q9NRD0 319 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 GIN1Q9NXP7 522 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PTGFRNQ9P2B2 879 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 PSME2Q9UL46 239 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MKL2Q9ULH7 1088 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 SRPK3Q9UPE1 567 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ZNF451Q9Y4E5 1061 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 MMACHCQ9Y4U1 282 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 HEMK1Q9Y5R4 338 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 GPC6Q9Y625 555 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 SPACA6W5XKT8 324 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 CPAMD8Q8IZJ3 1885 aa8.11□□□□□ -1.11
RIF1-208ENST00000457745 ZFHX2Q9C0A1 2572 aaPredicted RBP8.11□□□□□ -1.11
RIF1-208ENST00000457745 C7orf72A4D263 438 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 IDSB3KWA1 339 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 M0R3H8 397 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PEX12O00623 359 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ADAM10O14672 748 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 FFAR1O14842 300 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 OIP5O43482 229 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 TPST2O60704 377 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ADAM11O75078 769 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CPNE3O75131 537 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 KLF7O75840 302 aaPredicted RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 NKX2-2O95096 273 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 IFNA16P05015 189 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CT45A8P0DMV1 189 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CT45A9P0DMV2 189 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PRIM2P49643 509 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CLCN2P51788 898 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 AQP4P55087 323 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 SLC37A1P57057 533 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 DCDP81605 110 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 HOXC5Q00444 222 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 RBBP4Q09028 425 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 ATP6AP1Q15904 470 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 NDUFAF6Q330K2 333 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CT45A2Q5DJT8 189 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 C3orf38Q5JPI3 329 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 IRAK1BP1Q5VVH5 260 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 MLIPQ5VWP3 458 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 REEP3Q6NUK4 255 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ZNF517Q6ZMY9 492 aaPredicted RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 GLRX5Q86SX6 157 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CLIP4Q8N3C7 705 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PLPP5Q8NEB5 264 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 SLC2A12Q8TD20 617 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ADAMTS18Q8TE60 1221 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ZNF524Q96C55 264 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 SENP5Q96HI0 755 aaPredicted RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 PYURFQ96I23 114 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 TPD52L3Q96J77 140 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 COL21A1Q96P44 957 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 LMF2Q9BU23 707 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 SPATA9Q9BWV2 254 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ULBP3Q9BZM4 244 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 RTN4RQ9BZR6 473 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 AMBRA1Q9C0C7 1298 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 OR8D2Q9GZM6 311 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 TGIF2Q9GZN2 237 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 OR10A5Q9H207 317 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PIGUQ9H490 435 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CLK4Q9HAZ1 481 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 C3orf14Q9HBI5 128 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 MKKSQ9NPJ1 570 aaPredicted RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 BCAP29Q9UHQ4 241 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ANGPTL2Q9UKU9 493 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms