RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TLCD1Q96CP7 247 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 VSTM2LQ96N03 204 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 ADOQ96SZ5 270 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 PROK2Q9HC23 129 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 ACSS1Q9NUB1 689 aaPredicted RBP16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 PNPOQ9NVS9 261 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 NOP53Q9NZM5 478 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 MRTO4Q9UKD2 239 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 ACAD8Q9UKU7 415 aa16.58■□□□□ 0.24
PDLIM2-215ENST00000456545 HIVEP3Q5T1R4 2406 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 A0A1W2PRB8 838 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 OR6C70A6NIJ9 312 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 GNB5O14775 395 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 SCAMP2O15127 329 aaKnown RBP16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 UGT2B11O75310 529 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 RFPL3SP0C7P2 107 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 PRPS1L1P21108 318 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 PDE7AQ13946 482 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 PTGR1Q14914 329 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 SMU1Q2TAY7 513 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 C3P1Q6ZMU1 363 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 TRILQ7L0X0 811 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 MAMDC2Q7Z304 686 aaPredicted RBP16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 HDXQ7Z353 690 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 MRGPRGQ86SM5 289 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 OR2L13Q8N349 312 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 NATD1Q8N6N6 113 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 NUP43Q8NFH3 380 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 OR7A2PQ8NGA2 310 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 OR1J4Q8NGS1 313 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 NODALQ96S42 347 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 SORT1Q99523 831 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 OSBPL11Q9BXB4 747 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 NUF2Q9BZD4 464 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 AKTIPQ9H8T0 292 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 Q9N2J8 555 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 EQTNQ9NQ60 294 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 PLSCR2Q9NRY7 297 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 THAP1Q9NVV9 213 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 QPCTLQ9NXS2 382 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 ATP6V1HQ9UI12 483 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 MAPRE3Q9UPY8 281 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 MEMO1Q9Y316 297 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 FLNCQ14315 2725 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 RELNP78509 3460 aa16.57■□□□□ 0.24
PDLIM2-215ENST00000456545 PRAMEF25A6NGN4 478 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 TTC36A6NLP5 189 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 BCKDKO14874 412 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 CFLARO15519 480 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 SUSD5O60279 629 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 HCN1O60741 890 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 ICOSLGO75144 302 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 TRIM3O75382 744 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 IGHG3P01860 377 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 CELA3AP09093 270 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 G6PDP11413 515 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 EFNA1P20827 205 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 RFX3P48380 749 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 TRPC1P48995 793 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 PNLIPRP2P54317 469 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 SNTA1Q13424 505 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 DECR1Q16698 335 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 PGS1Q32NB8 556 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 LSM12Q3MHD2 195 aaKnown RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 VPS26BQ4G0F5 336 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 CYP27C1Q4G0S4 372 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 DESI1Q6ICB0 168 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 ANGPTL8Q6UXH0 198 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 FGD2Q7Z6J4 655 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 HGDQ93099 445 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 SARAFQ96BY9 339 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 EFHD2Q96C19 240 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 GNRHR2Q96P88 292 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 PHF12Q96QT6 1004 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 TP63Q9H3D4 680 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 ZNF703Q9H7S9 590 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 MANSC1Q9H8J5 431 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 ALKBH4Q9NXW9 302 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 CBLCQ9ULV8 474 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 SNX8Q9Y5X2 465 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 LIPGQ9Y5X9 500 aa16.56■□□□□ 0.24
PDLIM2-215ENST00000456545 C2orf72A6NCS6 295 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 OR14I1A6ND48 311 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 E9PLN8 166 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 EMC8O43402 210 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 IFI6P09912 130 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 KITP10721 976 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 LBPP18428 481 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 ELAVL4P26378 380 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 GABRA3P34903 492 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 CLK3P49761 638 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 CDK9P50750 372 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 PSMD4P55036 377 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 PRR5P85299 388 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 PSG6Q00889 435 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 GAB1Q13480 694 aa16.55■□□□□ 0.24
PDLIM2-215ENST00000456545 GXYLT1Q4G148 440 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms