RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 MTMR14Q8NCE2 650 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LCN9Q8WX39 176 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PIWIL1Q96J94 861 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ARHGAP39Q9C0H5 1083 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ATG5Q9H1Y0 275 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CPVLQ9H3G5 476 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MGAT4CQ9UBM8 478 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 EGFL7Q9UHF1 273 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FZD4Q9ULV1 537 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 NOX1Q9Y5S8 564 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PSAT1Q9Y617 370 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 HOXC13P31276 330 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LCN6P62502 163 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MAP1SQ66K74 1059 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GNPNAT1Q96EK6 184 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MYADMQ96S97 322 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SLC38A3Q99624 504 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 WRAP53Q9BUR4 548 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PRRG4Q9BZD6 226 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PGAP2Q9UHJ9 254 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 EDDM13A0A1B0GTR0 161 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LILRB3O75022 631 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF286BP0CG31 522 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TFPIP10646 304 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CKMT2P17540 419 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 AZGP1P25311 298 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LTKP29376 864 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FNDC3BQ53EP0 1204 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ZFAND4Q86XD8 727 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MRPS30Q9NP92 439 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PRMT8Q9NR22 394 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM248Q9NWD8 314 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OARD1Q9Y530 152 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 FAM166BA8MTA8 275 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ARHGAP33O14559 1287 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 BPIP17213 487 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CAMLGP49069 296 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PLA2G16P53816 162 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SUB1P53999 127 aaKnown RBP eCLIP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CRADDP78560 199 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PLA2G7Q13093 441 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SF1Q15637 639 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 LTB4RQ15722 352 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 SSX8Q7RTT4 187 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 JAGN1Q8N5M9 183 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 XAGE5Q8WWM1 108 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 COPS9Q8WXC6 57 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 KCNJ15Q99712 375 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 MRPL45Q9BRJ2 306 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 CD244Q9BZW8 370 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RLFQ13129 1914 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TRPM7Q96QT4 1865 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 A6NHS1 94 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RNASET2O00584 256 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PTHP01270 115 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 APODP05090 189 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 DAP3P51398 398 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 HCCSP53701 268 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RPS15AP62244 130 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 RPL7AP62424 266 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 ELAVL3Q14576 367 aaKnown RBP4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TANGO2Q6ICL3 276 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 KCNE4Q8WWG9 221 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 OR5P2Q8WZ92 322 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GJB4Q9NTQ9 266 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM98Q9Y2Y6 226 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 PMF1-BGLAPU3KQ54 211 aa4.98□□□□□ -1.61
CSMD3-204ENST00000455883 GP1BBP13224 206 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 NDUFV2P19404 249 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 HLA-DMAP28067 261 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 HYAL4Q2M3T9 481 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 AKIRIN2Q53H80 203 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 DHRS4L2Q6PKH6 230 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TMIGD1Q6UXZ0 262 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 GPC2Q8N158 579 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR1J1Q8NGS3 322 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 P2RY13Q9BPV8 354 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 HERPUD2Q9BSE4 406 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C1GALT1Q9NS00 363 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 TRBC2A0A5B9 178 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C2orf78A6NCI8 922 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 MEIS3P1A6NDR6 274 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 LUMP51884 338 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 SPIN3Q5JUX0 258 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ILDR1Q86SU0 546 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR5H2Q8NGV7 314 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 OR1E3Q8WZA6 343 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 HAS1Q92839 578 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 STRA6Q9BX79 667 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 RIMS4Q9H426 269 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 C8orf33Q9H7E9 229 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 PLEKHA3Q9HB20 300 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF275Q9NSD4 429 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 LOC102725191A0A1B0GVB3 256 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF705EA8MWA4 302 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-204ENST00000455883 VIPP01282 170 aa4.97□□□□□ -1.61
CSMD3-204ENST00000455883 ZBTB48P10074 688 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms