RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ARL8AQ96BM9 186 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 SH3GL2Q99962 352 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 DOHHQ9BU89 302 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 C1orf50Q9BV19 199 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 ANGPTL4Q9BY76 406 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 ZNF703Q9H7S9 590 aaPredicted RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 VIPAS39Q9H9C1 493 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 ZFP64Q9NPA5 681 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 NOP53Q9NZM5 478 aaKnown RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 SH3BP4Q9P0V3 963 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 NTMQ9P121 344 aa15.91■□□□□ 0.14
USP39-208ENST00000455732 EIF3LQ9Y262 564 aaKnown RBP15.91■□□□□ 0.14
USP39-208ENST00000455732 OR6C70A6NIJ9 312 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 FAM166BA8MTA8 275 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ABCB7O75027 752 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 SNX4O95219 450 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 IGHG3P01860 377 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 PRPS1L1P21108 318 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 CORO7P57737 925 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 HSPB3Q12988 150 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ATG16L1Q676U5 607 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 MTFR2Q6P444 385 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ARHGAP11AQ6P4F7 1023 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 PAOXQ6QHF9 649 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ZNF551Q7Z340 670 aaPredicted RBP15.9■□□□□ 0.14
USP39-208ENST00000455732 HDXQ7Z353 690 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 RIMKLAQ8IXN7 391 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 NATD1Q8N6N6 113 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 SLC35A4Q96G79 324 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ATP6V1G3Q96LB4 118 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 ZNF597Q96LX8 424 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 AKTIPQ9H8T0 292 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 MEAF6Q9HAF1 191 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 QPCTLQ9NXS2 382 aa15.9■□□□□ 0.14
USP39-208ENST00000455732 SUCOQ9UBS9 1254 aaKnown RBP15.9■□□□□ 0.14
USP39-208ENST00000455732 TTC36A6NLP5 189 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 KLF11O14901 512 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 UGT2B11O75310 529 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 ABOP16442 354 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 DCTP40126 519 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 CASP3P42574 277 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 MAGEA5P43359 124 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 ADORA2A-AS1P86434 159 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 PSG6Q00889 435 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 OCRLQ01968 901 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 ZNF155Q12901 538 aaPredicted RBP15.89■□□□□ 0.13
USP39-208ENST00000455732 SNTA1Q13424 505 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 CAMKMTQ7Z624 323 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 DOLPP1Q86YN1 238 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 HOXB13Q92826 284 aaPredicted RBP15.89■□□□□ 0.13
USP39-208ENST00000455732 TMBIM1Q969X1 311 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 RILPQ96NA2 401 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 COL21A1Q96P44 957 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 PHF12Q96QT6 1004 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 LMF2Q9BU23 707 aaKnown RBP15.89■□□□□ 0.13
USP39-208ENST00000455732 NUF2Q9BZD4 464 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 ATAD3AQ9NVI7 634 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 PNPOQ9NVS9 261 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 MAPRE3Q9UPY8 281 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 MEMO1Q9Y316 297 aa15.89■□□□□ 0.13
USP39-208ENST00000455732 PKDREJQ9NTG1 2253 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 A0A1B0GTH9 108 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 A0A1B0GVC2 190 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 CDC40O60508 579 aaKnown RBP eCLIP15.88■□□□□ 0.13
USP39-208ENST00000455732 TSPAN2O60636 221 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 NME6O75414 186 aaPredicted RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 G6PDP11413 515 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 GPC1P35052 558 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 PTGS2P35354 604 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 CDK9P50750 372 aaKnown RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 MANFP55145 182 aaKnown RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 CLDN8P56748 225 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 EFR3AQ14156 821 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 CYP27C1Q4G0S4 372 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 TTMPQ5BVD1 217 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 CPTPQ5TA50 214 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 BICRALQ6AI39 1079 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 ZNF787Q6DD87 383 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 OGFOD2Q6N063 350 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 RPTNQ6XPR3 784 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 MRGPRGQ86SM5 289 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 SLC44A2Q8IWA5 706 aaPredicted RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 ZNF808Q8N4W9 903 aaPredicted RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 OR7A2PQ8NGA2 310 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 PSMA8Q8TAA3 256 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 RNF138Q8WVD3 245 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 COQ8BQ96D53 544 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 TMEM41AQ96HV5 264 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 PRPF18Q99633 342 aaKnown RBP15.88■□□□□ 0.13
USP39-208ENST00000455732 DEFB127Q9H1M4 99 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 METTL7AQ9H8H3 244 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 MANSC1Q9H8J5 431 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 B4GALT7Q9UBV7 327 aa15.88■□□□□ 0.13
USP39-208ENST00000455732 OR14I1A6ND48 311 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 SLCO1B7G3V0H7 640 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 PRRG2O14669 202 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 ADAM10O14672 748 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 HDAC3O15379 428 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 SUSD5O60279 629 aa15.87■□□□□ 0.13
USP39-208ENST00000455732 HCN1O60741 890 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms