RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC34A3Q8N130 599 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 FBXW8Q8N3Y1 598 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 OR8J2Q8NGG1 315 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 OR5M3Q8NGP4 307 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 PSMA8Q8TAA3 256 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 TESCQ96BS2 214 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 OMA1Q96E52 524 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 OR52B2Q96RD2 323 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 FAM173AQ9BQD7 235 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 MED4Q9NPJ6 270 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 GPR45Q9Y5Y3 372 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 PCNX1Q96RV3 2341 aa18.33■□□□□ 0.52
COL9A3-202ENST00000452372 A0A0G2JMM0 328 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 A0A1W2PPB8 328 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 A0A1W2PRS3 328 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 PINLYPA6NC86 204 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 ANKRD33BA6NCL7 494 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 TTC36A6NLP5 189 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 KIR3DP1A8MWS1 328 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 EMC8O43402 210 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 DIAPH2O60879 1101 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 ZNF24P17028 368 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 CLNS1AP54105 237 aaKnown RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 RPP38P78345 283 aaKnown RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 PLCXD2Q0VAA5 305 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 ZNF155Q12901 538 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 ELOAQ14241 798 aaKnown RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 GK5Q6ZS86 529 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 NUP54Q7Z3B4 507 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 SIAH3Q8IW03 269 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 SLC44A2Q8IWA5 706 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 NUP43Q8NFH3 380 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 SPPL2AQ8TCT8 520 aa18.32■□□□□ 0.52
COL9A3-202ENST00000452372 LMF2Q9BU23 707 aaKnown RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 SIRT3Q9NTG7 399 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 CNOT11Q9UKZ1 510 aaKnown RBP18.32■□□□□ 0.52
COL9A3-202ENST00000452372 G3V3Y1 287 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 WISP2O76076 250 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 C6orf47O95873 294 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 PIGAP37287 484 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 DCTP40126 519 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 RFC3P40938 356 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 KIR3DL1P43629 444 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 DNASE1L1P49184 302 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 WNT3P56703 355 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 UFM1P61960 85 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 ZNHIT3Q15649 155 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-202ENST00000452372 DPY19L1Q2PZI1 675 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 KRTCAP3Q53RY4 240 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 PRAMEF20Q5VT98 475 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 OR4F3Q6IEY1 312 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 DIO2Q92813 273 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 HOXB13Q92826 284 aaPredicted RBP18.31■□□□□ 0.52
COL9A3-202ENST00000452372 HGDQ93099 445 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 TMBIM1Q969X1 311 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 FAM120BQ96EK7 910 aaKnown RBP18.31■□□□□ 0.52
COL9A3-202ENST00000452372 PROK2Q9HC23 129 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 OSGIN2Q9Y236 505 aa18.31■□□□□ 0.52
COL9A3-202ENST00000452372 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 OR6C70A6NIJ9 312 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 NPIPA5E9PKD4 350 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 LRRTM2O43300 516 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 REM1O75628 298 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 GLSO94925 669 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-202ENST00000452372 IDO1P14902 403 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 MAP3K8P41279 467 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 PRKAG1P54619 331 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 PRR5P85299 388 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 FOXO1Q12778 655 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 CYP27C1Q4G0S4 372 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 TBCELQ5QJ74 424 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 TMEM81Q6P7N7 255 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 ZCCHC12Q6PEW1 402 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 BNC2Q6ZN30 1099 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-202ENST00000452372 OR4N2Q8NGD1 307 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 GIMAP5Q96F15 307 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 SLC35A4Q96G79 324 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 TEX37Q96LM6 180 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 GPR137Q96N19 417 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 MS4A4EQ96PG1 132 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 TSPAN10Q9H1Z9 355 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-202ENST00000452372 CXorf36Q9H7Y0 433 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 NEUROD4Q9HD90 331 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 TUBA8Q9NY65 449 aaPredicted RBP18.3■□□□□ 0.52
COL9A3-202ENST00000452372 SEC14L3Q9UDX4 400 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 NPIPA1Q9UND3 350 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 OR10H1Q9Y4A9 318 aa18.3■□□□□ 0.52
COL9A3-202ENST00000452372 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.3■□□□□ 0.52
COL9A3-202ENST00000452372 PRSS51A0A1B0GVH4 220 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 RNASET2O00584 256 aaKnown RBP18.29■□□□□ 0.52
COL9A3-202ENST00000452372 UBDO15205 165 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ASNA1O43681 348 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 TSPAN2O60636 221 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 SCN2BO60939 215 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ABCB7O75027 752 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 UGT2B11O75310 529 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 UNC5CO95185 931 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 CASP3P42574 277 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 CCT3P49368 545 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms