RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GK3PQ14409 553 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 RFX4Q33E94 735 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ARHGAP40Q5TG30 622 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 FRRS1Q6ZNA5 592 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 COX18Q8N8Q8 333 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 GPR151Q8TDV0 419 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 TRIM45Q9H8W5 580 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 MKKSQ9NPJ1 570 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 TMEFF2Q9UIK5 374 aaPredicted RBP13.28□□□□□ -0.28
USP39-207ENST00000450066 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 WDR45Q9Y484 360 aa13.28□□□□□ -0.28
USP39-207ENST00000450066 J3KTA2 159 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 HRKO00198 91 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 SYT5O00445 386 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 FLRT2O43155 660 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 PRAMEF2O60811 474 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 STX11O75558 287 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 NKX2-2O95096 273 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 IFNA16P05015 189 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 MYF6P23409 242 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 ACP1P24666 158 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 PRKAR1BP31321 381 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 SSTR4P31391 388 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 NUBP1P53384 320 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 SPIBQ01892 262 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 ZNF155Q12901 538 aaPredicted RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 ZNF267Q14586 743 aaPredicted RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 LAPTM4AQ15012 233 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 ZNF311Q5JNZ3 666 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 DCST2Q5T1A1 773 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 PHF19Q5T6S3 580 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 AP1ARQ63HQ0 302 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 TYW3Q6IPR3 259 aaKnown RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 PMM1Q92871 262 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 ZG16BQ96DA0 208 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 LMF2Q9BU23 707 aaKnown RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 QRSL1Q9H0R6 528 aaKnown RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 ACER3Q9NUN7 267 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 C3orf18Q9UK00 162 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 MKLN1Q9UL63 735 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 SLC9A8Q9Y2E8 581 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 IFT52Q9Y366 437 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 PCDHGB5Q9Y5G0 923 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 ORC6Q9Y5N6 252 aa13.27□□□□□ -0.28
USP39-207ENST00000450066 HEMK1Q9Y5R4 338 aaPredicted RBP13.27□□□□□ -0.28
USP39-207ENST00000450066 GPR179Q6PRD1 2367 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 EPPINO95925 133 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 GNAO1P09471 354 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 IGFBP5P24593 272 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 GABRA3P34903 492 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 LIMS1P48059 325 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 RAD23AP54725 363 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 CDH12P55289 794 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 RHAGQ02094 409 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 BLMHQ13867 455 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 ZNHIT3Q15649 155 aaPredicted RBP13.27□□□□□ -0.29
USP39-207ENST00000450066 ZIK1Q3SY52 487 aaPredicted RBP13.27□□□□□ -0.29
USP39-207ENST00000450066 MINDY4Q4G0A6 757 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 ANKRD34AQ69YU3 496 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 KDM4DQ6B0I6 523 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 TCTN3Q6NUS6 607 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 FAHD1Q6P587 224 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 USP51Q70EK9 711 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 COMTD1Q86VU5 262 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 CYP4Z1Q86W10 505 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 BPHLQ86WA6 291 aaPredicted RBP13.27□□□□□ -0.29
USP39-207ENST00000450066 OR52P1PQ8NH57 321 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 VSTM2LQ96N03 204 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 TOR3AQ9H497 397 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 FOLH1BQ9HBA9 442 aa13.27□□□□□ -0.29
USP39-207ENST00000450066 SEC16AO15027 2179 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 CCDC88CQ9P219 2028 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 FAM86C2PA6NEL3 165 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 C17orf105B2RV13 164 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 FFAR1O14842 300 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 SCRG1O75711 98 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 TNNI3P19429 210 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 DAPP51397 102 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 PGDP52209 483 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 POU6F2P78424 691 aaPredicted RBP13.26□□□□□ -0.29
USP39-207ENST00000450066 ZFP36L1Q07352 338 aaKnown RBP13.26□□□□□ -0.29
USP39-207ENST00000450066 VWA2Q5GFL6 755 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 MFSD4BQ5TF39 518 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 PWWP2BQ6NUJ5 590 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 DHRS4L2Q6PKH6 230 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 HMGN2P46Q86SG4 172 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 PPP1R3BQ86XI6 285 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 PEX5LQ8IYB4 626 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 OR7G1Q8NGA0 311 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 OR4D11Q8NGI4 311 aa13.26□□□□□ -0.29
USP39-207ENST00000450066 VANGL1Q8TAA9 524 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms