RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RBBP9O75884 186 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 APBB3O95704 486 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 F11P03951 625 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 HCKP08631 526 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 MTHFD2P13995 350 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CA5AP35218 305 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ZNF41P51814 821 aaPredicted RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 PSMA6P60900 246 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 RAB2AP61019 212 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 HHEXQ03014 270 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 IQCF2Q8IXL9 164 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 RPLP0P6Q8NHW5 317 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 DAZLQ92904 295 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 MS4A4EQ96PG1 132 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 NAA50Q9GZZ1 169 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 SLC6A15Q9H2J7 730 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 PTGES2Q9H7Z7 377 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ACOT13Q9NPJ3 140 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 OLAHQ9NV23 265 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 NUDT15Q9NV35 164 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 MEMO1Q9Y316 297 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 RGS9O75916 674 aaPredicted RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 OR2B3O76000 313 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 KDM4BO94953 1096 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 PTTG1O95997 202 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CSTBP04080 98 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 PRKCAP17252 672 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 GRPRP30550 384 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ADH7P40394 386 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ZNF81P51508 661 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 PLCXD2Q0VAA5 305 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 BTBD16Q32M84 506 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 GGTA1PQ4G0N0 100 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 GLT8D1Q68CQ7 371 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ALG1LQ6GMV1 187 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 NCCRP1Q6ZVX7 275 aaPredicted RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 GAREM2Q75VX8 874 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 TMPRSS12Q86WS5 348 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ZNF615Q8N8J6 731 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ASCC1Q8N9N2 400 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 WDR20Q8TBZ3 569 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ZFP90Q8TF47 636 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 TMEM41AQ96HV5 264 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ZNF559Q9BR84 538 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 APOOQ9BUR5 198 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CPNE5Q9HCH3 593 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 SCP2D1Q9UJQ7 156 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 FARSAQ9Y285 508 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CSNK1G3Q9Y6M4 447 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 FAM221BA6H8Z2 402 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 H0YIV9 168 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 TSPAN4O14817 238 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 SMAD9O15198 467 aaKnown RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 CDK1P06493 297 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 S100A6P06703 90 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 PGFP49763 221 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ACTA2P62736 377 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ACTG2P63267 376 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 MGAT3Q09327 533 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 TMEM69Q5SWH9 247 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CDRT4Q8N9R6 151 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CYB561A3Q8NBI2 242 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 OR51L1Q8NGJ5 315 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 ACOT12Q8WYK0 555 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 DPH1Q9BZG8 443 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 NLKQ9UBE8 527 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 C19orf25Q9UFG5 118 aaPredicted RBP9.85□□□□□ -0.83
CTC1-202ENST00000449476 CD300AQ9UGN4 299 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 GMEB2Q9UKD1 530 aa9.85□□□□□ -0.83
CTC1-202ENST00000449476 CASC3O15234 703 aaKnown RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 CYP17A1P05093 508 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 HNRNPA2B1P22626 353 aaKnown RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 IMPA1P29218 277 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 LCN1P31025 176 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 SOX3P41225 446 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TCEAL6Q6IPX3 200 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TTLL10Q6ZVT0 673 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TMPRSS9Q7Z410 1059 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 B3GNT8Q7Z7M8 397 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 GPAT4Q86UL3 456 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TMIEQ8NEW7 156 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 THAP3Q8WTV1 239 aaPredicted RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 CCDC115Q96NT0 180 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 CNN2Q99439 309 aaKnown RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 PINK1Q9BXM7 581 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 DNMT3AQ9Y6K1 912 aaPredicted RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 SEMA4FO95754 770 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 PSMB5P28074 263 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 EIF5AP63241 154 aaKnown RBP9.84□□□□□ -0.83
CTC1-202ENST00000449476 ABCA11PQ4W5N1 156 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 TMEM225Q6GV28 225 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 USP53Q70EK8 1073 aa9.84□□□□□ -0.83
CTC1-202ENST00000449476 MEX3DQ86XN8 651 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms