RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TMBIM1Q969X1 311 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 ZBTB9Q96C00 473 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 REEP4Q9H6H4 257 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 MIEF1Q9NQG6 463 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 TAS2R9Q9NYW1 312 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 TNFRSF10DQ9UBN6 386 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 SPG11Q96JI7 2443 aa12.87□□□□□ -0.35
RTFDC1-204ENST00000449062 TRGV5A0A0B4J1U4 118 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 B4DXG7 233 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 BCKDKO14874 412 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 TM9SF1O15321 606 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 AKAP10O43572 662 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 PEX11AO75192 247 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 LYPLA1O75608 230 aaPredicted RBP12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 SERPINE1P05121 402 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 HPNP05981 417 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 PTPN6P29350 595 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 MAN2A2P49641 1150 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 CDK9P50750 372 aaKnown RBP12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 SMSP52788 366 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 GAS1P54826 345 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 RPL38P63173 70 aaKnown RBP12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 PLCXD2Q0VAA5 305 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 GAB1Q13480 694 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 SLC30A6Q6NXT4 461 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 DDIASQ8IXT1 998 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 NUDT8Q8WV74 236 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 PPP3R2Q96LZ3 170 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 COL21A1Q96P44 957 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 TSSK3Q96PN8 268 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 SORT1Q99523 831 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 TP63Q9H3D4 680 aaPredicted RBP12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 HAO1Q9UJM8 370 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 FAM215AQ9Y5M1 114 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
RTFDC1-204ENST00000449062 FBN2P35556 2912 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 WDR91A4D1P6 747 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 REM1O75628 298 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 HTR1EP28566 365 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 ASMTP46597 345 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 PNLIPRP2P54317 469 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 PSPHP78330 225 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 RPP38P78345 283 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 CYP27C1Q4G0S4 372 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 TMEM107Q6UX40 140 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 CROCCP2Q86T23 111 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 RIMKLAQ8IXN7 391 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 CLHC1Q8NHS4 586 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 CIDECQ96AQ7 238 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 ADOQ96SZ5 270 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 SLC6A15Q9H2J7 730 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 GALNT9Q9HCQ5 603 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 ACSS1Q9NUB1 689 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 PCDHGB3Q9Y5G1 929 aa12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 NUP214P35658 2090 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-204ENST00000449062 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 TMEM114B3SHH9 223 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 PRSS44E7EML9 344 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 SNPHO15079 494 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 FADS1O60427 444 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 ABCB7O75027 752 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 CLDN14O95500 239 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 ACVR2AP27037 513 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 NTSP30990 170 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 TRPC1P48995 793 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 ABCE1P61221 599 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 PMPCAQ10713 525 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 CHI3L2Q15782 390 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 IL23RQ5VWK5 629 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 VASNQ6EMK4 673 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 TMEM211Q6ICI0 200 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 LARP4Q71RC2 724 aaKnown RBP eCLIP12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 EID3Q8N140 333 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 ZNF781Q8N8C0 355 aa12.84□□□□□ -0.35
RTFDC1-204ENST00000449062 LILRB4Q8NHJ6 448 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms