RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 OR6C4Q8NGE1 309 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 ADAMTS18Q8TE60 1221 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 UBE2FQ969M7 185 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 GTPBP3Q969Y2 492 aaKnown RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 SDF2Q99470 211 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 SPRTNQ9H040 489 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 PRMT8Q9NR22 394 aaPredicted RBP16.53■□□□□ 0.24
LMNA-208ENST00000448611 DUSP22Q9NRW4 184 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 MKLN1Q9UL63 735 aa16.53■□□□□ 0.24
LMNA-208ENST00000448611 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.24
LMNA-208ENST00000448611 BLACEA4D250 179 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 CCDC160A6NGH7 325 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 TGFBR3LH3BV60 316 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 PCDHGA12O60330 932 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 CTNSO60931 367 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 UGT2B17O75795 530 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 ALOX5P09917 674 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 GSTT1P30711 240 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 GPR3P46089 330 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 ARRB1P49407 418 aaPredicted RBP16.52■□□□□ 0.23
LMNA-208ENST00000448611 IGLV3-21P80748 117 aaPredicted RBP16.52■□□□□ 0.23
LMNA-208ENST00000448611 MAP4K2Q12851 820 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 KCNAB1Q14722 419 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 PROX2Q3B8N5 592 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 PMS2CLQ68D20 193 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 KLHL17Q6TDP4 642 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 GPR141Q7Z602 305 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 SPARTQ8N0X7 666 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 OR52P1PQ8NH57 321 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 SLC7A13Q8TCU3 470 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 PRRC1Q96M27 445 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 STACQ99469 402 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 MTHFD2LQ9H903 347 aaPredicted RBP16.52■□□□□ 0.23
LMNA-208ENST00000448611 ENAMQ9NRM1 1142 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 MAN2C1Q9NTJ4 1040 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 IRAK4Q9NWZ3 460 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 SATB2Q9UPW6 733 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 MRPS33Q9Y291 106 aaKnown RBP16.52■□□□□ 0.23
LMNA-208ENST00000448611 GPR55Q9Y2T6 319 aaPredicted RBP16.52■□□□□ 0.23
LMNA-208ENST00000448611 WDR45Q9Y484 360 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 CLDN16Q9Y5I7 305 aa16.52■□□□□ 0.23
LMNA-208ENST00000448611 FAM86C2PA6NEL3 165 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 H3BMH7 237 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 XPNPEP2O43895 674 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 WBP4O75554 376 aaKnown RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 CBX7O95931 251 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 ADAP00813 363 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 MYF5P13349 255 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 JUNBP17275 347 aaPredicted RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 FMO3P31513 532 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 EMP3P54852 163 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 SLC13A2Q13183 592 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 DUSP8Q13202 625 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 SYT16Q17RD7 645 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 XAF1Q6GPH4 301 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 ZNF595Q8IYB9 648 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 VWA5B2Q8N398 1253 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 APH1BQ8WW43 257 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 HOXB13Q92826 284 aaPredicted RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 MMABQ96EY8 250 aaPredicted RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 FNDC11Q9BVV2 318 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 ZNF350Q9GZX5 532 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 CXorf21Q9HAI6 301 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 TMEM184BQ9Y519 407 aaPredicted RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 NINQ8N4C6 2090 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 ZDBF2Q9HCK1 2354 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 SH3PXD2BA1X283 911 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 DUX1O43812 170 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 OR10H2O60403 315 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 GNSP15586 552 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 S1PR1P21453 382 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 CSF2RBP32927 897 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 AVPR1BP47901 424 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 HSD11B2P80365 405 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 PIGFQ07326 219 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 GRM7Q14831 915 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 RAB39AQ14964 217 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 NEDD8Q15843 81 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 AMZ1Q400G9 498 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 CCNJQ5T5M9 372 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 PLXDC1Q8IUK5 500 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 CLIP4Q8N3C7 705 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 NMD3Q96D46 503 aaKnown RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 TRIM45Q9H8W5 580 aaPredicted RBP16.51■□□□□ 0.23
LMNA-208ENST00000448611 RASSF1Q9NS23 344 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 TMEM9Q9P0T7 183 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 ENOPH1Q9UHY7 261 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 MGAT4BQ9UQ53 548 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 RNF6Q9Y252 685 aa16.51■□□□□ 0.23
LMNA-208ENST00000448611 MN1Q10571 1320 aaPredicted RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 H0YIG0 161 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 LAMTOR5O43504 91 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 TPST2O60704 377 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 CDC123O75794 336 aaPredicted RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 GSSP48637 474 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 GPLD1P80108 840 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 SMN1Q16637 294 aaKnown RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 DCST2Q5T1A1 773 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms