RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 C9orf40Q8IXQ3 194 aa18.12■□□□□ 0.49
SGCE-207ENST00000447873 COX18Q8N8Q8 333 aa18.12■□□□□ 0.49
SGCE-207ENST00000447873 IMMP1LQ96LU5 166 aa18.12■□□□□ 0.49
SGCE-207ENST00000447873 MAGEL2Q9UJ55 1249 aa18.12■□□□□ 0.49
SGCE-207ENST00000447873 LIPT1Q9Y234 373 aa18.12■□□□□ 0.49
SGCE-207ENST00000447873 A8MVJ9 347 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 CXCR6O00574 342 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 PEX12O00623 359 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 ARPC2O15144 300 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 SLC28A2O43868 658 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 NKX2-2O95096 273 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 BCHEP06276 602 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 PCGF2P35227 344 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 DCAF7P61962 342 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 RNF4P78317 190 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 GNA13Q14344 377 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 EBPQ15125 230 aaKnown RBP18.11■□□□□ 0.49
SGCE-207ENST00000447873 SYPL1Q16563 259 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 GPAT3Q53EU6 434 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 PLAG1Q6DJT9 500 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 REEP3Q6NUK4 255 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 MRGPREQ86SM8 312 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 PROSER1Q86XN7 944 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 SLC30A8Q8IWU4 369 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 AMER2Q8N7J2 671 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 PIK3R3Q92569 461 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 FGF11Q92914 225 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 WWTR1Q9GZV5 400 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 ZNF160Q9HCG1 818 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 Q9N2J8 555 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 P4HTMQ9NXG6 502 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 ZNF223Q9UK11 482 aaPredicted RBP18.11■□□□□ 0.49
SGCE-207ENST00000447873 ANGPT4Q9Y264 503 aa18.11■□□□□ 0.49
SGCE-207ENST00000447873 GPR55Q9Y2T6 319 aaPredicted RBP18.11■□□□□ 0.49
SGCE-207ENST00000447873 TRBV11-1A0A0K0K1C0 115 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 ACOT8O14734 319 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 HPP00738 406 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 CT45A8P0DMV1 189 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 CT45A9P0DMV2 189 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 PPICP45877 212 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 CLN3Q13286 438 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 NNATQ16517 81 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 CT45A2Q5DJT8 189 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 INTS11Q5TA45 600 aaKnown RBP18.1■□□□□ 0.49
SGCE-207ENST00000447873 CYP2R1Q6VVX0 501 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 NPSR1Q6W5P4 371 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 METTL25Q8N6Q8 603 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 HIPK4Q8NE63 616 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 M1APQ8TC57 530 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 WDR60Q8WVS4 1066 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 TMEM19Q96HH6 336 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 LRGUKQ96M69 825 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 IP6K3Q96PC2 410 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 BTBD9Q96Q07 612 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 BTBD2Q9BX70 525 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 FBXL4Q9UKA2 621 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 OR10H1Q9Y4A9 318 aa18.1■□□□□ 0.49
SGCE-207ENST00000447873 PRAMEF27A3QJZ7 478 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 AQP1P29972 269 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 CRISP3P54108 245 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 POU6F2P78424 691 aaPredicted RBP18.09■□□□□ 0.49
SGCE-207ENST00000447873 HPCAP84074 193 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 ARHGAP11BQ3KRB8 267 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 HEPHL1Q6MZM0 1159 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 ANKFN1Q8N957 763 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 OR5L2Q8NGL0 311 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 OR8K3Q8NH51 312 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 ADAMTS17Q8TE56 1095 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 FAM162AQ96A26 154 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 ADIPOR1Q96A54 375 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 NAF1Q96HR8 494 aaKnown RBP18.09■□□□□ 0.49
SGCE-207ENST00000447873 LCORQ96JN0 433 aaPredicted RBP18.09■□□□□ 0.49
SGCE-207ENST00000447873 TRNT1Q96Q11 434 aaKnown RBP18.09■□□□□ 0.49
SGCE-207ENST00000447873 MMP25Q9NPA2 562 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 RRP15Q9Y3B9 282 aaKnown RBP18.09■□□□□ 0.49
SGCE-207ENST00000447873 ZNF451Q9Y4E5 1061 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 CEP295Q9C0D2 2601 aa18.09■□□□□ 0.49
SGCE-207ENST00000447873 GXYLT2A0PJZ3 443 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 H0YHG0 523 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 PRKNO60260 465 aaPredicted RBP18.08■□□□□ 0.49
SGCE-207ENST00000447873 ZFAND5O76080 213 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 AK1P00568 194 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 ICAM2P13598 275 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 DRD5P21918 477 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 TRHRP34981 398 aaPredicted RBP18.08■□□□□ 0.49
SGCE-207ENST00000447873 FUT5Q11128 374 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 ATP1A4Q13733 1029 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 DCST2Q5T1A1 773 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 LCN8Q6JVE9 175 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 SPPL2CQ8IUH8 684 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 BHLHE22Q8NFJ8 381 aaPredicted RBP18.08■□□□□ 0.49
SGCE-207ENST00000447873 OR4N2Q8NGD1 307 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 NUBPLQ8TB37 319 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 ELP5Q8TE02 316 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 RMND5BQ96G75 393 aaPredicted RBP18.08■□□□□ 0.49
SGCE-207ENST00000447873 TREX2Q9BQ50 279 aaPredicted RBP18.08■□□□□ 0.49
SGCE-207ENST00000447873 DEFB126Q9BYW3 111 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 TRIM15Q9C019 465 aa18.08■□□□□ 0.49
SGCE-207ENST00000447873 NXF5Q9H1B4 397 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms