RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ANKRD19PQ9H560 264 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CTPS2Q9NRF8 586 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 LIPT1Q9Y234 373 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 PDE4DIPQ5VU43 2346 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 HEATR5BQ9P2D3 2071 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 NOTOA8MTQ0 251 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 MAN2B1O00754 1011 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CHST10O43529 356 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 OR1F1O43749 312 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SLC43A1O75387 559 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CLEC3AO75596 197 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CCNYL3P0C7X3 344 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 GALP22466 123 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 PSMB5P28074 263 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 NTSP30990 170 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SOX18P35713 384 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 IL12RB1P42701 662 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 CDH11P55287 796 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 TAS2R41P59536 307 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 TRAM2Q15035 370 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SF3A2Q15428 464 aaKnown RBP17.93■□□□□ 0.46
SDCBP-204ENST00000447182 AADACL4Q5VUY2 407 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SYCE2Q6PIF2 218 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 SHFQ7M4L6 423 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 LHFPL3Q86UP9 236 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 ZFP41Q8N8Y5 198 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 COX14Q96I36 57 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 FAIM2Q9BWQ8 316 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 ASB6Q9NWX5 421 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 EXOGQ9Y2C4 368 aaKnown RBP17.93■□□□□ 0.46
SDCBP-204ENST00000447182 PRKAB1Q9Y478 270 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 ASB4Q9Y574 426 aa17.93■□□□□ 0.46
SDCBP-204ENST00000447182 FAM240BA0A1B0GVZ2 78 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 GABRPO00591 440 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 IGHA1P01876 353 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 NOGQ13253 232 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 IL18Q14116 193 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 TRILQ7L0X0 811 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 OR52N1Q8NH53 320 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 NEIL3Q8TAT5 605 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 DNAJA4Q8WW22 397 aaPredicted RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 SMG7Q92540 1137 aaKnown RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 DIO2Q92813 273 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 SENP5Q96HI0 755 aaPredicted RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 DCLRE1CQ96SD1 692 aaKnown RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ARHGDIGQ99819 225 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 BTBD1Q9H0C5 482 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 C11orf49Q9H6J7 331 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 MED17Q9NVC6 651 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 SLC23A2Q9UGH3 650 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 PHF11Q9UIL8 331 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ADAM30Q9UKF2 790 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 LCMT2O60294 686 aaKnown RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ZNF780AO75290 641 aaPredicted RBP17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ADRB3P13945 408 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 OMPP47874 163 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 MADCAM1Q13477 382 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 UAP1L1Q3KQV9 507 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 TMEM52BQ4KMG9 183 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 HMGN2P46Q86SG4 172 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 UPRTQ96BW1 309 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 BBS4Q96RK4 519 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 JAM3Q9BX67 310 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 ING3Q9NXR8 418 aa17.92■□□□□ 0.46
SDCBP-204ENST00000447182 MYO10Q9HD67 2058 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 SHISA3A0PJX4 238 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 SURF4O15260 269 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 SLC19A2O60779 497 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 HMGN2P05204 90 aaKnown RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 SSR2P43308 183 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 CSNK1G2P78368 415 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 ABATP80404 500 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 ST3GAL3Q11203 375 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 LASP1Q14847 261 aaKnown RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 DHCR24Q15392 516 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 METRNLQ641Q3 311 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 ZNF793Q6ZN11 406 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 MEX3DQ86XN8 651 aaKnown RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 KLHL36Q8N4N3 616 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 OSTF1Q92882 214 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 MOAP1Q96BY2 351 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 OTUB1Q96FW1 271 aaPredicted RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 TMED9Q9BVK6 235 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 GTPBP2Q9BX10 602 aaKnown RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 CFHR5Q9BXR6 569 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 HDHD5Q9BXW7 423 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 IL20Q9NYY1 176 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 CNIH4Q9P003 139 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 NLKQ9UBE8 527 aa17.91■□□□□ 0.46
SDCBP-204ENST00000447182 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.91■□□□□ 0.46
SDCBP-204ENST00000447182 LRIT2A6NDA9 550 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ARHGEF9O43307 516 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ORC5O43913 435 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 RHOP08100 348 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 CHRNB1P11230 501 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ACP5P13686 325 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 CELP19835 753 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms