RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 PDK1Q15118 436 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CDK10Q15131 360 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ANGPT1Q15389 498 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NPTX1Q15818 432 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NEDD8Q15843 81 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCDC58Q4VC31 144 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PIGGQ5H8A4 983 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RBM48Q5RL73 367 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCNYL2Q5T2Q4 361 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 WBP2NLQ6ICG8 309 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 NANOGP8Q6NSW7 305 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PRMT9Q6P2P2 845 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 DCUN1D2Q6PH85 259 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRAT1Q6PIZ9 186 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMEM26Q6ZUK4 368 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 USP43Q70EL4 1123 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TMPRSS11BQ86T26 416 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ERO1BQ86YB8 467 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 HPS6Q86YV9 775 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CFAP206Q8IYR0 622 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RFLNBQ8N5W9 214 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR7A2PQ8NGA2 310 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 OR13F1Q8NGS4 319 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TBCKQ8TEA7 893 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 DEPDC1BQ8WUY9 529 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CCDC107Q8WV48 283 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 DCAKDQ8WVC6 231 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PROX1Q92786 737 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 FAM162AQ96A26 154 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CIDECQ96AQ7 238 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 DNAJC19Q96DA6 116 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 VMP1Q96GC9 406 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CDHR1Q96JP9 859 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF583Q96ND8 569 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 CPNE1Q99829 537 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZNF717Q9BY31 904 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 HOXD1Q9GZZ0 328 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RSPH9Q9H1X1 276 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ARRDC1-AS1Q9H2J1 176 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 LIN28AQ9H9Z2 209 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 WDR41Q9HAD4 459 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 SIAEQ9HAT2 523 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ZBTB20Q9HC78 741 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 Q9N2K0 584 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 RPRD1BQ9NQG5 326 aaKnown RBP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 FBXO8Q9NRD0 319 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 SERINC1Q9NRX5 453 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 EMC3Q9P0I2 261 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TXNDC16Q9P2K2 825 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC17A7Q9P2U7 560 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 B3GAT1Q9P2W7 334 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 PLLPQ9Y342 182 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 DOCK1Q14185 1865 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 ABCA3Q99758 1704 aa4.07□□□□□ -1.76
HMGB1P16-201ENST00000447155 TNS2Q63HR2 1409 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A087WV48 116 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RNF103-CHMP3A0A140T963 221 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 A0A1W2PQ72 361 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RGSL1A5PLK6 1076 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PRR23AA6NEV1 266 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM64A6NGJ6 449 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRPC5OSA6NMA1 111 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 GOLGA8JA6NMD2 632 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 BBIP1A8MTZ0 92 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 E9PI62 339 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 H0YAE9 185 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 GAPDHSO14556 408 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRDMT1O14717 391 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CHADO15335 359 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SYNCRIPO60506 623 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 TRIM3O75382 744 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 AKAP3O75969 853 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PROSCO94903 275 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 MFN2O95140 757 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SEC24AO95486 1093 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 IFNB1P01574 187 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 S100A6P06703 90 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 GPIP06744 558 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RALAP11233 206 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 HOXB6P17509 224 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 PRKACAP17612 351 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 IL10P22301 178 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CFL1P23528 166 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 F8A1P23610 371 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CXCR2P25025 360 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ADSSP30520 456 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CSTF2P33240 577 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CAPGP40121 348 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 OPRL1P41146 370 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 CASP3P42574 277 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 BTDP43251 543 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 GNPDA1P46926 289 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LEPRP48357 1165 aaKnown RBP4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC1A6P48664 564 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 LHX1P48742 406 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 RGS7P49802 495 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 SLC26A2P50443 739 aa4.06□□□□□ -1.76
HMGB1P16-201ENST00000447155 ERFP50548 548 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms