RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 NODALQ96S42 347 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 TTYH2Q9BSA4 534 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 OSBPL11Q9BXB4 747 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 GLIPR2Q9H4G4 154 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 FIS1Q9Y3D6 152 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 FAM215AQ9Y5M1 114 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 EXPH5Q8NEV8 1989 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 TTC36A6NLP5 189 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 FAM47E-STBD1D6RA91 191 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 UPK1AO00322 258 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 SNPHO15079 494 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 RGS16O15492 202 aaPredicted RBP17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 TSPAN2O60636 221 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 REM1O75628 298 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 SDC1P18827 310 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PTPN6P29350 595 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 KRT20P35900 424 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PTGDSP41222 190 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 MC3RP41968 323 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 ASMTP46597 345 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PNLIPRP2P54317 469 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PSG6Q00889 435 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PMPCAQ10713 525 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 CYP27C1Q4G0S4 372 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 RTL6Q6ICC9 239 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 DDIASQ8IXT1 998 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 RPRMLQ8N4K4 120 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 ACBD4Q8NC06 268 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 MTERF3Q96E29 417 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 ELP4Q96EB1 424 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 PPP3R2Q96LZ3 170 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 SPOCK3Q9BQ16 436 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 SLC6A15Q9H2J7 730 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 REEP4Q9H6H4 257 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 KLRF1Q9NZS2 232 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 RNF6Q9Y252 685 aa17.21■□□□□ 0.35
ATPAF2-201ENST00000444058 CACNA1DQ01668 2161 aa17.21■□□□□ 0.34
ATPAF2-201ENST00000444058 PRAMEF25A6NGN4 478 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TMEM114B3SHH9 223 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TMEM233B4DJY2 109 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 CBR3O75828 277 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TRAPPC6AO75865 159 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 COX6B1P14854 86 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 DDX5P17844 614 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 NUP107P57740 925 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 RPL38P63173 70 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 PDE7AQ13946 482 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 XKR7Q5GH72 579 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TNFAIP8L3Q5GJ75 292 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 SH2D4BQ5SQS7 431 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 C1orf185Q5T7R7 199 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TMEM107Q6UX40 140 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 ANGPTL8Q6UXH0 198 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 NPSR1Q6W5P4 371 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 ZCCHC23Q6ZST2 131 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 RNF138Q8WVD3 245 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 DTNBP1Q96EV8 351 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 ADOQ96SZ5 270 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 DDX18Q9NVP1 670 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 TNFRSF10DQ9UBN6 386 aa17.2■□□□□ 0.34
ATPAF2-201ENST00000444058 CACNA1CQ13936 2221 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 AHRRA9YTQ3 701 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PIP5K1BO14986 540 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 TM9SF1O15321 606 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 BIRC5O15392 142 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PDPK1O15530 556 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 SNUPNO95149 360 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 GLI4P10075 376 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 MAPK1P28482 360 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 IL12BP29460 328 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ARRB2P32121 409 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 FRKP42685 505 aaPredicted RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 SERPINB4P48594 390 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 CRYZQ08257 329 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 SF3B4Q15427 424 aaKnown RBP eCLIP17.19■□□□□ 0.341e-11■■■■■ 54.4
ATPAF2-201ENST00000444058 VASNQ6EMK4 673 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 DESI1Q6ICB0 168 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 LRIG3Q6UXM1 1119 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 LARP4Q71RC2 724 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 NUDCD3Q8IVD9 361 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 SLC44A2Q8IWA5 706 aaPredicted RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PM20D2Q8IYS1 436 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 WDSUB1Q8N9V3 476 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ZFP28Q8NHY6 868 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PPCDCQ96CD2 204 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ZBED6CLQ96FA7 236 aaPredicted RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 TIMP4Q99727 224 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 LMF2Q9BU23 707 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PRDM14Q9GZV8 571 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ENKD1Q9H0I2 346 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ACSS1Q9NUB1 689 aaPredicted RBP17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 OR10H1Q9Y4A9 318 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 ACTL7BQ9Y614 415 aa17.19■□□□□ 0.34
ATPAF2-201ENST00000444058 PHF3Q92576 2039 aaKnown RBP17.18■□□□□ 0.34
ATPAF2-201ENST00000444058 C15orf38-AP3S2A0A0A6YYH1 394 aa17.18■□□□□ 0.34
ATPAF2-201ENST00000444058 C19orf84I3L1E1 186 aa17.18■□□□□ 0.34
ATPAF2-201ENST00000444058 GNB5O14775 395 aa17.18■□□□□ 0.34
ATPAF2-201ENST00000444058 NME6O75414 186 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-201ENST00000444058 BCKDHAP12694 445 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms