RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MARVELD3Q96A59 401 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CMTM7Q96FZ5 175 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SEPT5Q99719 369 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 YIPF4Q9BSR8 244 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 DPH7Q9BTV6 452 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF436Q9C0F3 470 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TGIF2Q9GZN2 237 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SLC32A1Q9H598 525 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 AUNIPQ9H7T9 357 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CRLF2Q9HC73 371 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TAS2R7Q9NYW3 318 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 OARD1Q9Y530 152 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FKBP7Q9Y680 259 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SCN4AP35499 1836 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 NUMA1Q14980 2115 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TTLL8A6PVC2 850 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CACNB4O00305 520 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FFAR1O14842 300 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 NARSO43776 548 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SCN2BO60939 215 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FGF18O76093 207 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TGFB1P01137 390 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SMIM10L2AP0DMW4 78 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SMIM10L2BP0DMW5 78 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ACADLP28330 430 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PRKAG1P54619 331 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 BEX3Q00994 111 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SNTB2Q13425 540 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ATXN7L3Q14CW9 347 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SWI5Q1ZZU3 235 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 PLA1AQ53H76 456 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 BEX5Q5H9J7 111 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SMARCD3Q6STE5 483 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM107Q6UX40 140 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF704Q6ZNC4 412 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CLRN3Q8NCR9 226 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 OR52B4Q8NGK2 314 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 RPLP0P6Q8NHW5 317 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ORAI1Q96D31 301 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FBXO17Q96EF6 278 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF582Q96NG8 517 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SLC38A2Q96QD8 506 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FAIM2Q9BWQ8 316 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SHARPINQ9H0F6 387 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 FAM124BQ9H5Z6 455 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 RC3H2Q9HBD1 1191 aaKnown RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 SGK2Q9HBY8 427 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM248Q9NWD8 314 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TEX10Q9NXF1 929 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 CNIH4Q9P003 139 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 TRPC4Q9UBN4 977 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 VPS29Q9UBQ0 182 aa7.11□□□□□ -1.27
HDAC9-214ENST00000441542 ZFP37Q9Y6Q3 630 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-214ENST00000441542 A0A0G2JPF8 293 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HNRNPCL3B7ZW38 293 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 F5H5T6 163 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 K7ERQ8 282 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF593O00488 134 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 STK25O00506 426 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 IGF2P01344 180 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 IFNA14P01570 189 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SRPRAP08240 638 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 NMBP08949 121 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MRPL3P09001 348 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HNRNPCL4P0DMR1 293 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HSD3B1P14060 373 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ACSL1P33121 698 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PCGF2P35227 344 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TRIM23P36406 574 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OPRD1P41143 372 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 KCNJ3P48549 501 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZP1P60852 638 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 POLR2GP62487 172 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MC2RQ01718 297 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SCRN3Q0VDG4 424 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 NAE1Q13564 534 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 VEZF1Q14119 521 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MPEG1Q2M385 716 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZXDCQ2QGD7 858 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 C11orf88Q6PI97 169 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LRRN1Q6UXK5 716 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 QSOX2Q6ZRP7 698 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LINGO2Q7L985 606 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CBLN2Q8IUK8 224 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 VRK3Q8IV63 474 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LINC01465Q8N7H1 131 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OR51G2Q8NGK0 314 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OR13C5Q8NGS8 318 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TRMT10AQ8TBZ6 339 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 EID2BQ96D98 161 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MS4A4AQ96JQ5 239 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 DMRTA2Q96SC8 542 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CRB3Q9BUF7 120 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OR51B5Q9H339 312 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OSGEPL1Q9H4B0 414 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SLC25A19Q9HC21 320 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 THSD1Q9NS62 852 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms