RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 COL19A1Q14993 1142 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 GPR19Q15760 415 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ITPRIPL2Q3MIP1 535 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC35F1Q5T1Q4 408 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 PDZK1Q5T2W1 519 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC27A4Q6P1M0 643 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ZNF730Q6ZMV8 503 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ZNF793Q6ZN11 406 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 LINC01555Q8NAE3 123 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SYT14Q8NB59 555 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 LILRB4Q8NHJ6 448 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 TEX47Q8TBZ9 253 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CXorf40AQ8TE69 158 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC7A6Q92536 515 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 AP3S1Q92572 193 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 OTUB1Q96FW1 271 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 FAIM2Q9BWQ8 316 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 PINK1Q9BXM7 581 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ANKRA2Q9H9E1 313 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CCDC182A6NF36 153 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SNTNA6NMZ2 147 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 A8MV72 311 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 B4DXG7 233 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 MAN2B1O00754 1011 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 TFECO14948 347 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 TMCC2O75069 709 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 APOL3O95236 402 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 KAT7O95251 611 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ALPPP05187 535 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CHRM5P08912 532 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 FGF9P31371 208 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 BUD31P41223 144 aaPredicted RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SOX9P48436 509 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ANXA11P50995 505 aaKnown RBP15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 TAS2R38P59533 333 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 GNA13Q14344 377 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CDK10Q15131 360 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 C6orf183Q5T699 404 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CD200R1LQ6Q8B3 271 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 HMGN2P46Q86SG4 172 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 ZNF485Q8NCK3 441 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 OR8D4Q8NGM9 314 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 GNPDA2Q8TDQ7 276 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 RNF170Q96K19 258 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 C17orf62Q9BQA9 187 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 SAP130Q9H0E3 1048 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 CTPS2Q9NRF8 586 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 MYO10Q9HD67 2058 aa15.4■□□□□ 0.06
CLCNKA-203ENST00000439316 TRIOO75962 3097 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A087WUU8 490 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A0G2JPF8 293 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 WASHC1A8K0Z3 465 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 HNRNPCL2B2RXH8 293 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 HNRNPCL3B7ZW38 293 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 LIMS3P0CW19 117 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 LIMS4P0CW20 117 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 HNRNPCL4P0DMR1 293 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 POU3F3P20264 500 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 MTNR1AP48039 350 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 MRPS15P82914 257 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 CDK3Q00526 305 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 CRTC2Q53ET0 693 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 PRAMEF8Q5VWM4 474 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 PRAMEF7Q5VXH5 474 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 KIAA1161Q6NSJ0 714 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 WASH2PQ6VEQ5 465 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 UTS2BQ765I0 119 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 MTSS1LQ765P7 747 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 ASCC1Q8N9N2 400 aaKnown RBP15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 GATAD2BQ8WXI9 593 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 C1GALT1C1Q96EU7 318 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 DMRTB1Q96MA1 342 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 NECTIN4Q96NY8 510 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 ARHGAP9Q9BRR9 750 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 NOX1Q9Y5S8 564 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 CKAP5Q14008 2032 aa15.39■□□□□ 0.05
CLCNKA-203ENST00000439316 IGKV1-8A0A0C4DH67 115 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 LRIT2A6NDA9 550 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SYT5O00445 386 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 PLA2G10O15496 165 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 LRRTM2O43300 516 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 PRKRAO75569 313 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 ZNF24P17028 368 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 FABP5Q01469 135 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 TSPAN31Q12999 210 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 LASP1Q14847 261 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 PYDC2Q56P42 97 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 MEX3DQ86XN8 651 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 ANKK1Q8NFD2 765 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 NR4A3Q92570 626 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC9A6Q92581 669 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 CAMK1GQ96NX5 476 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 DEPDC7Q96QD5 511 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 BBS4Q96RK4 519 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 TM9SF2Q99805 663 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 ARHGDIGQ99819 225 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 YIPF4Q9BSR8 244 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 RERGLQ9H628 205 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 TOR4AQ9NXH8 423 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms