RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
PRAME-209ENST00000439106 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
PRAME-209ENST00000439106 NTNG2Q96CW9 530 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 BTBD9Q96Q07 612 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 SECISBP2Q96T21 854 aaKnown RBP12.64□□□□□ -0.39
PRAME-209ENST00000439106 GLIPR2Q9H4G4 154 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 ACKR4Q9NPB9 350 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 SERHLQ9NQF3 203 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 QPCTLQ9NXS2 382 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 Q9UFV3 132 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
PRAME-209ENST00000439106 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 PRAMEF25A6NGN4 478 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SNPHO15079 494 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 TO15178 435 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 AKAP10O43572 662 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 WDR1O75083 606 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SNX4O95219 450 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 HPNP05981 417 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SDC1P18827 310 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 EFNA1P20827 205 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 NTSP30990 170 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 MPIP34949 423 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 DCAF7P61962 342 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 TFF3Q07654 80 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 HSPB3Q12988 150 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 GALNTL6Q49A17 601 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SEM1Q6ZVN7 128 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 ACAD11Q709F0 780 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 ZNF551Q7Z340 670 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 NUP54Q7Z3B4 507 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 LIX1LQ8IVB5 337 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SLC44A2Q8IWA5 706 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 DDIASQ8IXT1 998 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 ULK2Q8IYT8 1036 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 SAMD14Q8IZD0 417 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 FAM83FQ8NEG4 500 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 OR1J4Q8NGS1 313 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 TWIST2Q8WVJ9 160 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 ASB5Q8WWX0 329 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 CIDECQ96AQ7 238 aaPredicted RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 TSSK3Q96PN8 268 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 C1orf109Q9NX04 203 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 FLRT3Q9NZU0 649 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 BAIAP2L1Q9UHR4 511 aa12.63□□□□□ -0.39
PRAME-209ENST00000439106 ANKHD1Q8IWZ3 2542 aaKnown RBP12.63□□□□□ -0.39
PRAME-209ENST00000439106 B4DXG7 233 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 H3BQF6 201 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 UPK1AO00322 258 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 SLC28A1O00337 649 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PIP5K1BO14986 540 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 RGS14O43566 566 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PLOD3O60568 738 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 TSPAN2O60636 221 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 BCAS2O75934 225 aaPredicted RBP12.62□□□□□ -0.39
PRAME-209ENST00000439106 TOXO94900 526 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 NAGAP17050 411 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 BMP7P18075 431 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PRPH2P23942 346 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PTGER4P35408 488 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 GSTM5P46439 218 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 KRTAP10-9P60411 292 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PSG6Q00889 435 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 RFTN2Q52LD8 501 aaPredicted RBP12.62□□□□□ -0.39
PRAME-209ENST00000439106 ARL13AQ5H913 290 aaPredicted RBP12.62□□□□□ -0.39
PRAME-209ENST00000439106 OR5M10Q6IEU7 315 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 WDR93Q6P2C0 686 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 LARP4Q71RC2 724 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRAME-209ENST00000439106 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 NAXEQ8NCW5 288 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 LILRB4Q8NHJ6 448 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 AMDHD1Q96NU7 426 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 COL21A1Q96P44 957 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 TIMP4Q99727 224 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 UGT2B28Q9BY64 529 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 ENKD1Q9H0I2 346 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 RYDENQ9NUL5 291 aaKnown RBP12.62□□□□□ -0.39
PRAME-209ENST00000439106 TAS2R9Q9NYW1 312 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 CAMK2AQ9UQM7 478 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
PRAME-209ENST00000439106 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
PRAME-209ENST00000439106 OR6C70A6NIJ9 312 aa12.61□□□□□ -0.39
PRAME-209ENST00000439106 LSM1O15116 133 aaKnown RBP12.61□□□□□ -0.39
PRAME-209ENST00000439106 SCO2O43819 266 aa12.61□□□□□ -0.39
PRAME-209ENST00000439106 ZNF500O60304 480 aaPredicted RBP12.61□□□□□ -0.39
PRAME-209ENST00000439106 NPHS1O60500 1241 aa12.61□□□□□ -0.39
PRAME-209ENST00000439106 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
PRAME-209ENST00000439106 LYPLA1O75608 230 aaPredicted RBP12.61□□□□□ -0.39
PRAME-209ENST00000439106 CYP4B1P13584 511 aa12.61□□□□□ -0.39
PRAME-209ENST00000439106 IL12BP29460 328 aa12.61□□□□□ -0.39
PRAME-209ENST00000439106 ZFP36L2P47974 494 aaKnown RBP12.61□□□□□ -0.39
PRAME-209ENST00000439106 RFX3P48380 749 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms