RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C17orf47Q8NEP4 570 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 OR7G2Q8NG99 324 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 METTL6Q8TCB7 284 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 C16orf78Q8WTQ4 265 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 LRRC46Q96FV0 321 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 COL21A1Q96P44 957 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 YIPF4Q9BSR8 244 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 FAIM2Q9BWQ8 316 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 FUT8Q9BYC5 575 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 FOLH1BQ9HBA9 442 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 TRPS1Q9UHF7 1281 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 DKKL1Q9UK85 242 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 PSME2Q9UL46 239 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 TMCO1Q9UM00 188 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 GPR55Q9Y2T6 319 aaPredicted RBP12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 WIF1Q9Y5W5 379 aa12.94□□□□□ -0.34
SMARCE1-205ENST00000431889 ABCA4P78363 2273 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 EXOC1LA0A1B0GW35 172 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 FRG2CA6NGY1 282 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 PLOD2O00469 737 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 ACTL6AO96019 429 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 DRD5P21918 477 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 OPRM1P35372 400 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 PPICP45877 212 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 RFX3P48380 749 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 LHX2P50458 406 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 KEAP1Q14145 624 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 FBXL19-AS1Q494R0 122 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 GPRIN3Q6ZVF9 776 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 RELL1Q8IUW5 271 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 NINJ1Q92982 152 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 SFXN2Q96NB2 322 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 SHCBP1LQ9BZQ2 653 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 RTN4RQ9BZR6 473 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 CALHM2Q9HA72 323 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 C6orf203Q9P0P8 240 aaPredicted RBP12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 PRODH2Q9UF12 536 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 NFU1Q9UMS0 254 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 CFL2Q9Y281 166 aa12.93□□□□□ -0.34
SMARCE1-205ENST00000431889 TSPAN2O60636 221 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 CBR3O75828 277 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 SNRPAP09012 282 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 COL6A2P12110 1019 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 IL12BP29460 328 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 GFRA1P56159 465 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 ZNF155Q12901 538 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 SPDYAQ5MJ70 313 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 PAMR1Q6UXH9 720 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 PLCZ1Q86YW0 608 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 MMGT1Q8N4V1 131 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 CHDHQ8NE62 594 aaPredicted RBP12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 ZPLD1Q8TCW7 415 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 MTBPQ96DY7 904 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 JKAMPQ9P055 326 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 SENP1Q9P0U3 644 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 TBK1Q9UHD2 729 aa12.92□□□□□ -0.34
SMARCE1-205ENST00000431889 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 UBFD1O14562 309 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 ACOX3O15254 700 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 ULK1O75385 1050 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 ATE1O95260 518 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 KRT6AP02538 564 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 KRT6BP04259 564 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 CPN1P15169 458 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 NAGAP17050 411 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 HOXB4P17483 251 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 TAC1P20366 129 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 GRK2P25098 689 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 KRT6CP48668 564 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 SIRPAP78324 504 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 FAM27E3Q08E93 113 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 DAZAP2Q15038 168 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 RASA2Q15283 850 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 VWA1Q6PCB0 445 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 TMEM107Q6UX40 140 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 GALNT10Q86SR1 603 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 GRAMD2AQ8IUY3 354 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 CCNYL1Q8N7R7 359 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 CNEP1R1Q8N9A8 125 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 VSTM2LQ96N03 204 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 C1QTNF3Q9BXJ4 246 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 C12orf65Q9H3J6 166 aaKnown RBP12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 DSN1Q9H410 356 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 PLEKHF2Q9H8W4 249 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 MED11Q9P086 117 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 MCM8Q9UJA3 840 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 ZNF180Q9UJW8 692 aa12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 OR10H1Q9Y4A9 318 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms