RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PTGFRNQ9P2B2 879 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 A0A0J9YY10 115 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SPTY2D1-AS1A0A0U1RR47 76 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 KRBA1A5PL33 1030 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 DUXAA6NLW8 204 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CYR61O00622 381 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ZSCAN9O15535 394 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 AIREO43918 545 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 FCMRO60667 390 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SULT1C4O75897 302 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 AGR2O95994 175 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ACP2P11117 423 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CPMP14384 443 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 PVRP15151 417 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF12P17014 697 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 RPS4Y1P22090 263 aaKnown RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 RGS6P49758 472 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 RAB15P59190 212 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TUBA1BP68363 451 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SIM1P81133 766 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 OCA2Q04671 838 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF846Q147U1 533 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ARHGAP11BQ3KRB8 267 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TUBA1AQ71U36 451 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ABHD13Q7L211 337 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 PRSS41Q7RTY9 318 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ATCAYQ86WG3 371 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TMEM52Q8NDY8 209 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SLC37A2Q8TED4 501 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 OR5M11Q96RB7 305 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 NXF2Q9GZY0 626 aaKnown RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CHRDQ9H2X0 955 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 FAIMQ9NVQ4 179 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 C19orf53Q9UNZ5 99 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ERGIC3Q9Y282 383 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 IFT52Q9Y366 437 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 A0A087WV62 115 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 OR5K4A6NMS3 321 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CYP7B1O75881 506 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 THY1P04216 161 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ATP1B1P05026 303 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 MAP3K8P41279 467 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF91Q05481 1191 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 NCF4Q15080 339 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ATAD3BQ5T9A4 648 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TYW3Q6IPR3 259 aaKnown RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ACSM5Q6NUN0 579 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 C16orf62Q7Z3J2 963 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 BTLAQ7Z6A9 289 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CHPT1Q8WUD6 406 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 S100ZQ8WXG8 99 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 CDS1Q92903 461 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 Q96MT0 163 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 WDR12Q9GZL7 423 aaKnown RBP13.05□□□□□ -0.32
HOXC4-202ENST00000430889 KLHL25Q9H0H3 589 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 DCSTAMPQ9H295 470 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TBCCD1Q9NVR7 557 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
HOXC4-202ENST00000430889 TDRD6O60522 2096 aaKnown RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 METTL15A6NJ78 407 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 H3BN98 237 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 MAGEB3O15480 346 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 KLF4O43474 513 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 PRKYO43930 277 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 RPLP0P05388 317 aaKnown RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 BMP4P12644 408 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 PORP16435 677 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GSTM3P21266 225 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF10P21506 573 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 TLX1P31314 330 aaPredicted RBP13.04□□□□□ -0.32
HOXC4-202ENST00000430889 OMPP47874 163 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GIPRP48546 466 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 SERPINB10P48595 397 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 PCYT1AP49585 367 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GAS1P54826 345 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 OLR1P78380 273 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 RHAGQ02094 409 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 MGAT2Q10469 447 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 NR1D2Q14995 579 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 TRAM2Q15035 370 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 DUSP5Q16690 384 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 DCDC5Q6ZRR9 648 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 Q6ZS52 159 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 GJD3Q8N144 294 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 IQCF1Q8N6M8 205 aa13.04□□□□□ -0.32
HOXC4-202ENST00000430889 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms