RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CLCF1Q9UBD9 225 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 STK38LQ9Y2H1 464 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 MRPS18CQ9Y3D5 142 aaKnown RBP13.54□□□□□ -0.24
MSH5-208ENST00000429846 MED12LQ86YW9 2145 aa13.54□□□□□ -0.24
MSH5-208ENST00000429846 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 CLCA1A8K7I4 914 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 MANBAO00462 879 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 PCDH7O60245 1069 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 ULK1O75385 1050 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 REM1O75628 298 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 SNRPAP09012 282 aaKnown RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 SBK3P0C264 359 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 KRT20P35900 424 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 HSD17B3P37058 310 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 CPA2P48052 419 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 AGFG1P52594 562 aaKnown RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 DIO3P55073 304 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 MRPS22P82650 360 aaKnown RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 FOXD4Q12950 439 aaPredicted RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 HEPACAMQ14CZ8 416 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 DESI1Q6ICB0 168 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 TRIM42Q8IWZ5 723 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 MMGT1Q8N4V1 131 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 SIMC1Q8NDZ2 872 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 LINC01560Q8TB33 94 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 DACH2Q96NX9 599 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 HBEGFQ99075 208 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 STMN4Q9H169 189 aaPredicted RBP13.53□□□□□ -0.24
MSH5-208ENST00000429846 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 TAS2R10Q9NYW0 307 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 DLGAP4Q9Y2H0 992 aa13.53□□□□□ -0.24
MSH5-208ENST00000429846 MAP1AP78559 2803 aaPredicted RBP13.52□□□□□ -0.24
MSH5-208ENST00000429846 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 CCDC151A5D8V7 595 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 SUPT7LO94864 414 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ATE1O95260 518 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 IL3P08700 152 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ZNF708P17019 499 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 TSPAN8P19075 237 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 IL12BP29460 328 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 HMOX2P30519 316 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 LHX2P50458 406 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 PNLIPRP2P54317 469 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 SRYQ05066 204 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ACSM2AQ08AH3 577 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ZNF678Q5SXM1 525 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ACSM2BQ68CK6 577 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 FAM180BQ6P0A1 224 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 CCDC116Q8IYX3 515 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 CNPY4Q8N129 248 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 RNF138Q8WVD3 245 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 SMPDL3BQ92485 455 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 MTBPQ96DY7 904 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 VSTM2LQ96N03 204 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 SFXN2Q96NB2 322 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 G6PC3Q9BUM1 346 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ACPTQ9BZG2 426 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 DLL4Q9NR61 685 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 GALNT8Q9NY28 637 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 SENP1Q9P0U3 644 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 HEY2Q9UBP5 337 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 DMGDHQ9UI17 866 aaKnown RBP13.52□□□□□ -0.25
MSH5-208ENST00000429846 DKKL1Q9UK85 242 aa13.52□□□□□ -0.25
MSH5-208ENST00000429846 ZNF469Q96JG9 3925 aaPredicted RBP13.52□□□□□ -0.25
MSH5-208ENST00000429846 EXOC1LA0A1B0GW35 172 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 HCRTR2O43614 444 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 PLOD3O60568 738 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 TSPAN2O60636 221 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 SLITRK5O94991 958 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
MSH5-208ENST00000429846 CRHP06850 196 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 CT45A8P0DMV1 189 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 CT45A9P0DMV2 189 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 ECHS1P30084 290 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
MSH5-208ENST00000429846 PCYT1AP49585 367 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 CLDN18P56856 261 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 ADAM8P78325 824 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 FOXF2Q12947 444 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 GLE1Q53GS7 698 aaKnown RBP13.51□□□□□ -0.25
MSH5-208ENST00000429846 CT45A2Q5DJT8 189 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 TCHHL1Q5QJ38 904 aaPredicted RBP13.51□□□□□ -0.25
MSH5-208ENST00000429846 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 GALNT18Q6P9A2 607 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 TIFABQ6ZNK6 161 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 LARP4Q71RC2 724 aaKnown RBP eCLIP13.51□□□□□ -0.25
MSH5-208ENST00000429846 LUZP2Q86TE4 346 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 SLC22A9Q8IVM8 553 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 FAM9CQ8IZT9 166 aa13.51□□□□□ -0.25
MSH5-208ENST00000429846 OR9A2Q8NGT5 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms