RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 TRBV5-4A0A0C4DH59 114 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 A0A1B0GVT2 93 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 DNASE1P24855 282 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 ELAVL4P26378 380 aaKnown RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 VIPR2P41587 438 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 MC3RP41968 323 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 PGDP52209 483 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 ELAVL3Q14576 367 aaKnown RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 ODF4Q2M2E3 257 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 ENPP7Q6UWV6 458 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 NRSN1Q8IZ57 195 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
CPNE4-201ENST00000429747 TSEN15Q8WW01 171 aaKnown RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 DDX31Q9H8H2 851 aaKnown RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 CXXC1Q9P0U4 656 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 PPIEQ9UNP9 301 aaKnown RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-201ENST00000429747 A0A075B6Q4 140 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 AGR2O95994 175 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 CSF2RAP15509 400 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 ZNF24P17028 368 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 CST5P28325 142 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 XCR1P46094 333 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PON3Q15166 354 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 FCRLBQ6BAA4 426 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MTFR2Q6P444 385 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 IL20RBQ6UXL0 311 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC35B4Q969S0 331 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 DTD2Q96FN9 168 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SIPA1Q96FS4 1042 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SNX18Q96RF0 628 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PITX2Q99697 317 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLA2Q9H6Q3 261 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 ZNF69Q9UC07 566 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MRPS33Q9Y291 106 aaKnown RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 C1orf226A1L170 272 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 TSPAN5P62079 268 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SIM1P81133 766 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 B4GALNT1Q00973 533 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 RAB40BQ12829 278 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 FGFBP1Q14512 234 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PIP5KL1Q5T9C9 394 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC44A3Q8N4M1 653 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SYT14Q8NB59 555 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 OR56A3Q8NH54 315 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 TMEM38AQ9H6F2 299 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MKKSQ9NPJ1 570 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 YARS2Q9Y2Z4 477 aaKnown RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 CDH10Q9Y6N8 788 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 LRRN3E7EW58 273 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PRKYO43930 277 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 ADRB3P13945 408 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 HOXA9P31269 272 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 UQCRC1P31930 480 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 AHRP35869 848 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 EIF4EBP2Q13542 120 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC25A25Q6KCM7 469 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 FIGNL1Q6PIW4 674 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 DPPA4Q7L190 304 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 OR4K14Q8NGD5 310 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC7A13Q8TCU3 470 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PSD2Q9BQI7 771 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 DPH1Q9BZG8 443 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 LRRN3Q9H3W5 708 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC52A3Q9NQ40 469 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 TEX10Q9NXF1 929 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 A0A0G2JPF8 293 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 UNC119BA6NIH7 251 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 HNRNPCL3B7ZW38 293 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 RGS9O75916 674 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 HNRNPCL4P0DMR1 293 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SOX2P48431 317 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MAZP56270 477 aaKnown RBP11.93□□□□□ -0.5
CPNE4-201ENST00000429747 OR12D2P58182 307 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 SLC7A9P82251 487 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 PRRC1Q96M27 445 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 ACSL5Q9ULC5 683 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 MGAT4AQ9UM21 535 aa11.93□□□□□ -0.5
CPNE4-201ENST00000429747 F5P12259 2224 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 ANTXRLA6NF34 631 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 ZMAT1Q5H9K5 638 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 NRROSQ86YC3 692 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 ZNF676Q8N7Q3 588 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 C12orf76Q8N812 135 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-201ENST00000429747 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 RPLP0P6Q8NHW5 317 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 SLC41A3Q96GZ6 507 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 HYLS1Q96M11 299 aa11.92□□□□□ -0.5
CPNE4-201ENST00000429747 ALOXE3Q9BYJ1 711 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms