RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 C4orf33Q8N1A6 199 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 EMC1Q8N766 993 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 OSR1Q8TAX0 266 aaPredicted RBP5.72□□□□□ -1.49
PTPRK-211ENST00000429595 GDAP1Q8TB36 358 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 MGARPQ8TDB4 240 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 FAM172AQ8WUF8 416 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 TFB1MQ8WVM0 346 aaKnown RBP5.72□□□□□ -1.49
PTPRK-211ENST00000429595 LCN9Q8WX39 176 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 CDKL2Q92772 493 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 RNASE6Q93091 150 aaKnown RBP5.72□□□□□ -1.49
PTPRK-211ENST00000429595 ERP27Q96DN0 273 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 OXNAD1Q96HP4 312 aaPredicted RBP5.72□□□□□ -1.49
PTPRK-211ENST00000429595 CELF6Q96J87 481 aaKnown RBP5.72□□□□□ -1.49
PTPRK-211ENST00000429595 SPATA13Q96N96 652 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 PSKH2Q96QS6 385 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 SIGLEC11Q96RL6 698 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 NUDCD1Q96RS6 583 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 CCDC28BQ9BUN5 200 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 WWP1Q9H0M0 922 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 SLC26A1Q9H2B4 701 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 PLAC1Q9HBJ0 212 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 ANKRD10Q9NXR5 420 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 HACD3Q9P035 362 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 PCSK1NQ9UHG2 260 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 C3orf18Q9UK00 162 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 FZD10Q9ULW2 581 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 SPEF1Q9Y4P9 236 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 TLN2Q9Y4G6 2542 aa5.72□□□□□ -1.49
PTPRK-211ENST00000429595 NUP210LQ5VU65 1888 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PCM1Q15154 2024 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CCDC88CQ9P219 2028 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 A0A087WWL8 130 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 RGSL1A5PLK6 1076 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CD8B2A6NJW9 211 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 GLRA3O75311 464 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PDE9AO76083 593 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 APOA4P06727 396 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TPBGLP0DKB5 382 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TPH1P17752 444 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PGAM1P18669 254 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 ADRA1DP25100 572 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 ACVR2AP27037 513 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 GJC1P36383 396 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SPINT3P49223 89 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 EMP2P54851 167 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 BASP1P80723 227 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 XIAPP98170 497 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 EEF1A2Q05639 463 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 KLC1Q07866 573 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 IL10RBQ08334 325 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 NIPAL4Q0D2K0 466 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TRAF2Q12933 501 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 MEP1AQ16819 746 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HYAL4Q2M3T9 481 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 DEFB110Q30KQ9 67 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CCDC153Q494R4 210 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 DNAL1Q4LDG9 190 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SPANXN3Q5MJ09 141 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SCYL2Q6P3W7 929 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 AAGABQ6PD74 315 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 KDELC1Q6UW63 502 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 C9orf47Q6ZRZ4 202 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 ZNF534Q76KX8 674 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PRUNE1Q86TP1 453 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CRLF3Q8IUI8 442 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 LIX1LQ8IVB5 337 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CHERPQ8IWX8 916 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 KIRREL3Q8IZU9 778 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 BEST3Q8N1M1 668 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 RPRMLQ8N4K4 120 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 C3orf56Q8N813 242 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 POGLUT1Q8NBL1 392 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 MAPK1IP1LQ8NDC0 245 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HSPH1Q92598 858 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 GLYATL1Q969I3 302 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 C12orf66Q96MD2 445 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TSGA13Q96PP4 275 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CSPG4P5Q96PW8 444 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 OLFM1Q99784 485 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TTYH2Q9BSA4 534 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SNRNP25Q9BV90 132 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HES7Q9BYE0 225 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 MAGEB5Q9BZ81 275 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SLC39A8Q9C0K1 460 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 IQCGQ9H095 443 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 CXorf56Q9H5V9 222 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 KIR3DX1Q9H7L2 352 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SLCO1B3Q9NPD5 702 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 SLC22A11Q9NSA0 550 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 TMEM184CQ9NVA4 438 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 STX18Q9P2W9 335 aaKnown RBP5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HEY2Q9UBP5 337 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 HAO1Q9UJM8 370 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 MID2Q9UJV3 735 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PLCL2Q9UPR0 1127 aa5.71□□□□□ -1.5
PTPRK-211ENST00000429595 PPIL1Q9Y3C6 166 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms