RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 C17orf53Q8N3J3 647 aaPredicted RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 C1orf52Q8N6N3 182 aaKnown RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 OR4N2Q8NGD1 307 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 SELENOMQ8WWX9 145 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ISL2Q96A47 359 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ELOVL6Q9H5J4 265 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 BEX4Q9NWD9 120 aaPredicted RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 KLHL28Q9NXS3 571 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ZNF225Q9UK10 706 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 PSME2Q9UL46 239 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 GPR55Q9Y2T6 319 aaPredicted RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 ABCA2Q9BZC7 2435 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 A0A1W2PNV4 684 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 STX16-NPEPL1H3BU86 382 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 STX16O14662 325 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 CT45A8P0DMV1 189 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 CT45A9P0DMV2 189 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 COL6A2P12110 1019 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 GCKP35557 465 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 SNTA1Q13424 505 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 CT45A2Q5DJT8 189 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 NPSR1Q6W5P4 371 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 UBQLNLQ8IYU4 475 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 OR5M1Q8NGP8 315 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 STARD4Q96DR4 205 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 ARSGQ96EG1 525 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 SFXN2Q96NB2 322 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 COL21A1Q96P44 957 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 UCN2Q96RP3 112 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 PIGQQ9BRB3 760 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 FUT8Q9BYC5 575 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 OPN3Q9H1Y3 402 aaPredicted RBP14.98□□□□□ -0.01
VARS-216ENST00000428445 PFDN4Q9NQP4 134 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 NMRK1Q9NWW6 199 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 NINJ2Q9NZG7 142 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 UTS2RQ9UKP6 389 aa14.98□□□□□ -0.01
VARS-216ENST00000428445 FRG2CA6NGY1 282 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 SMAD7O15105 426 aaKnown RBP14.97□□□□□ -0.01
VARS-216ENST00000428445 TO15178 435 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ACOX3O15254 700 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 TSPAN2O60636 221 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 OR4F21O95013 312 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ESRRBO95718 433 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 SBK3P0C264 359 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZNF708P17019 499 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 SRD5A2P31213 254 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 CLDN15P56746 228 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 B3GALT5-AS1P59052 145 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 TSNAXIP1Q2TAA8 658 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 GGTA1PQ4G0N0 100 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZNF628Q5EBL2 1059 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 Q5PR19 223 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZNF474Q6S9Z5 364 aaPredicted RBP14.97□□□□□ -0.01
VARS-216ENST00000428445 C22orf34Q6ZV56 151 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZNF550Q7Z398 422 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 P4HA3Q7Z4N8 544 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 BTLAQ7Z6A9 289 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 PRIMA1Q86XR5 153 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 CNEP1R1Q8N9A8 125 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 OR9A2Q8NGT5 310 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 EXOSC8Q96B26 276 aaKnown RBP14.97□□□□□ -0.01
VARS-216ENST00000428445 EFHD2Q96C19 240 aaPredicted RBP14.97□□□□□ -0.01
VARS-216ENST00000428445 TMCO6Q96DC7 493 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 PIK3IP1Q96FE7 263 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZDHHC18Q9NUE0 388 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 FLRT3Q9NZU0 649 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 PRODH2Q9UF12 536 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 NDRG3Q9UGV2 375 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 DKKL1Q9UK85 242 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 EIF3LQ9Y262 564 aaKnown RBP14.97□□□□□ -0.01
VARS-216ENST00000428445 TESMINQ9Y4I5 508 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 ZNF780BQ9Y6R6 833 aa14.97□□□□□ -0.01
VARS-216ENST00000428445 NSD1Q96L73 2696 aaPredicted RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 OR6C70A6NIJ9 312 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 DEFB108AA8MXU0 73 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 H7C1Q1 480 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 DSCAMO60469 2012 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 SMIM24O75264 130 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 GOSR1O95249 250 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 IL3P08700 152 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 RPS17P08708 135 aaKnown RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 GRK2P25098 689 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 DPP4P27487 766 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 SERPINB9P50453 376 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 SUCLG1P53597 346 aaKnown RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 GAS1P54826 345 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 SIRPAP78324 504 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 RAE1P78406 368 aaKnown RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 PRSS53Q2L4Q9 553 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 SHEQ5VZ18 495 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 ANKRD34AQ69YU3 496 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 LARP4Q71RC2 724 aaKnown RBP eCLIP14.96□□□□□ -0.01
VARS-216ENST00000428445 P3H2Q8IVL5 708 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 UHMK1Q8TAS1 419 aaKnown RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 ZNF483Q8TF39 744 aaPredicted RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 SMPDL3BQ92485 455 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 FIG4Q92562 907 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 ZNF592Q92610 1267 aa14.96□□□□□ -0.01
VARS-216ENST00000428445 ZC3HAV1LQ96H79 300 aaKnown RBP14.96□□□□□ -0.01
VARS-216ENST00000428445 Q96MF0 132 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms