RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RRAGDQ9NQL2 400 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 MID2Q9UJV3 735 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 EXO1Q9UQ84 846 aaKnown RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 PCDHGB3Q9Y5G1 929 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 OR6C70A6NIJ9 312 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 MYO1GB0I1T2 1018 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 PLOD3O60568 738 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 BMP7P18075 431 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 IL12BP29460 328 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 KRT20P35900 424 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 MC3RP41968 323 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 VSNL1P62760 191 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 SNTA1Q13424 505 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 VASNQ6EMK4 673 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 NOXRED1Q6NXP6 359 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 TMEM107Q6UX40 140 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 SLC44A2Q8IWA5 706 aaPredicted RBP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 DMRTC2Q8IXT2 367 aaPredicted RBP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 NAXEQ8NCW5 288 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 TNIP2Q8NFZ5 429 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 SLC35A4Q96G79 324 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 APOPT1Q96IL0 206 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 GATA5Q9BWX5 397 aaPredicted RBP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 PRDM14Q9GZV8 571 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 IQCGQ9H095 443 aaKnown RBP16.78■□□□□ 0.28
PSPC1-202ENST00000427943 CCL27Q9Y4X3 112 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 PCNX3Q9H6A9 2034 aa16.78■□□□□ 0.28
PSPC1-202ENST00000427943 AHRRA9YTQ3 701 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 FAM47E-STBD1D6RA91 191 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 TSPAN2O60636 221 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 SEC22BO75396 215 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 TACR1P25103 407 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 NTSP30990 170 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 SH2D4BQ5SQS7 431 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 LARP4Q71RC2 724 aaKnown RBP eCLIP16.77■□□□□ 0.28
PSPC1-202ENST00000427943 PM20D2Q8IYS1 436 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 WDSUB1Q8N9V3 476 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 RELL2Q8NC24 303 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-202ENST00000427943 OR4N2Q8NGD1 307 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 FAM76AQ8TAV0 307 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 ABTB1Q969K4 478 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-202ENST00000427943 EFHD2Q96C19 240 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-202ENST00000427943 TMCO6Q96DC7 493 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 EGLN2Q96KS0 407 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 STMN4Q9H169 189 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-202ENST00000427943 GLIPR2Q9H4G4 154 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 MCCC2Q9HCC0 563 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 TAS2R9Q9NYW1 312 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 OR10H1Q9Y4A9 318 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 WIF1Q9Y5W5 379 aa16.77■□□□□ 0.28
PSPC1-202ENST00000427943 AZIN1O14977 448 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 COQ9O75208 318 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 EPPINO95925 133 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 SLC25A35Q3KQZ1 300 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 NHSL2Q5HYW2 709 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 ANKRD26P1Q6NSI1 321 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 TRABD2AQ86V40 505 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 CLYBLQ8N0X4 340 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 OR2T11Q8NH01 316 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 OR14L1PQ8NHC6 308 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 GFM2Q969S9 779 aaKnown RBP16.76■□□□□ 0.27
PSPC1-202ENST00000427943 WDYHV1Q96HA8 205 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 FAM111AQ96PZ2 611 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 TRIB1Q96RU8 372 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 MECRQ9BV79 373 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 LRTM1Q9HBL6 345 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 MKS1Q9NXB0 559 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 SLC17A7Q9P2U7 560 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 ITGB1BP2Q9UKP3 347 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 MED12LQ86YW9 2145 aa16.76■□□□□ 0.27
PSPC1-202ENST00000427943 HSPB2A8KAH6 182 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 C17orf51A8MQB3 221 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 SLC28A1O00337 649 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 RGS14O43566 566 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 TRIM13O60858 407 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 ABCB7O75027 752 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 SPAG7O75391 227 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 CBR3O75828 277 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 NUDT17P0C025 328 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 BMP5P22003 454 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 TCEA1P23193 301 aaKnown RBP16.75■□□□□ 0.27
PSPC1-202ENST00000427943 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 DLX5P56178 289 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 PSG6Q00889 435 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 MYBPHQ13203 477 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 SNTB1Q13884 538 aaKnown RBP16.75■□□□□ 0.27
PSPC1-202ENST00000427943 EFR3AQ14156 821 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 KIAA0040Q15053 153 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 HSPB2Q16082 182 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 OR5M10Q6IEU7 315 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 IKBIPQ70UQ0 350 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 LACC1Q8IV20 430 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 RIBC1Q8N443 379 aaPredicted RBP16.75■□□□□ 0.27
PSPC1-202ENST00000427943 BANPQ8N9N5 519 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 AMDHD1Q96NU7 426 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 ZNF559Q9BR84 538 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 OR2B2Q9GZK3 357 aa16.75■□□□□ 0.27
PSPC1-202ENST00000427943 TUBB1Q9H4B7 451 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms