RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 FCGR2AP12318 317 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 APEX1P27695 318 aaKnown RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 DEKP35659 375 aaKnown RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 BUD31P41223 144 aaPredicted RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 LIMS1P48059 325 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 CDKN2DP55273 166 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 HNRNPH2P55795 449 aaKnown RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 RWDD2BP57060 319 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 TGM3Q08188 693 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 KLF1Q13351 362 aaPredicted RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 STK11Q15831 433 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 C11orf63Q6NUN7 778 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 METTL25Q8N6Q8 603 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 NUP43Q8NFH3 380 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 TANKQ92844 425 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 VPS39Q96JC1 886 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 TRIM54Q9BYV2 358 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 POTEKPQ9BYX7 375 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 UNKLQ9H9P5 680 aaKnown RBP8.1□□□□□ -1.11
LSG1-202ENST00000427461 CXorf21Q9HAI6 301 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 MED29Q9NX70 200 aa8.1□□□□□ -1.11
LSG1-202ENST00000427461 NPIPA5A0A0B4J1W7 369 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 LOC390937A0A1W2PQ73 354 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 NPIPA7E9PJI5 369 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 LILRA1O75019 489 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 WDR47O94967 919 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 NPIPA8P0DM63 369 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 HKR1P10072 659 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 NAGAP17050 411 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 GNAZP19086 355 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 HK1P19367 917 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 GRK2P25098 689 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 AGTR1P30556 359 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 SSR2P43308 183 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 CDH15P55291 814 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 DSCR4P56555 118 aaPredicted RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 RPS3AP61247 264 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 TNFRSF17Q02223 184 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 PLCXD2Q0VAA5 305 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 FOXL1Q12952 345 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 BIKQ13323 160 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 THOC5Q13769 683 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 DHX34Q14147 1143 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 PPA1Q15181 289 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 OASLQ15646 514 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 ZSWIM7Q19AV6 140 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 AP5B1Q2VPB7 878 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 SLC22A25Q6T423 547 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 Q6ZSR9 355 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 USP43Q70EL4 1123 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 NUFIP2Q7Z417 695 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 GGNQ86UU5 652 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 RETREG3Q86VR2 466 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 KRT78Q8N1N4 520 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 ANKS4BQ8N8V4 417 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 ZDHHC22Q8N966 263 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 C7orf57Q8NEG2 295 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 OR2W6PQ8NHA6 318 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 KISS1RQ969F8 398 aaPredicted RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 ZNF669Q96BR6 464 aaPredicted RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 PELOQ9BRX2 385 aaKnown RBP8.09□□□□□ -1.11
LSG1-202ENST00000427461 TBCDQ9BTW9 1192 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 ITPAQ9BY32 194 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 DSN1Q9H410 356 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 NT5DC2Q9H857 520 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.09□□□□□ -1.11
LSG1-202ENST00000427461 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 ASIC3Q9UHC3 531 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 PTGDR2Q9Y5Y4 395 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 COMMD10Q9Y6G5 202 aa8.09□□□□□ -1.11
LSG1-202ENST00000427461 TCRBV7S3A2A0A539 114 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 EIF1AYO14602 144 aaKnown RBP8.08□□□□□ -1.12
LSG1-202ENST00000427461 LYZL6O75951 148 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 SCELO95171 688 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 TGFB1P01137 390 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 OPN1LWP04000 364 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 EPB42P16452 691 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 CD22P20273 847 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 GSTM2P28161 218 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 STIP1P31948 543 aaKnown RBP8.08□□□□□ -1.12
LSG1-202ENST00000427461 HPDP32754 393 aaPredicted RBP8.08□□□□□ -1.12
LSG1-202ENST00000427461 CETN2P41208 172 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 TERF1P54274 439 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 DVL1P1P54792 670 aaPredicted RBP8.08□□□□□ -1.12
LSG1-202ENST00000427461 GAS1P54826 345 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 UBASH3AP57075 661 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 MAP4K2Q12851 820 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 TFAP2EQ6VUC0 442 aa8.08□□□□□ -1.12
LSG1-202ENST00000427461 BHLHA15Q7RTS1 189 aaPredicted RBP8.08□□□□□ -1.12
LSG1-202ENST00000427461 GPR180Q86V85 440 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms