RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PPP3CBP16298 524 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 CSNK2A2P19784 350 aaPredicted RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 SSTR1P30872 391 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 SPRP35270 261 aaPredicted RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 IDUAP35475 653 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 GP5P40197 560 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 MGAT2Q10469 447 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 CAPRIN1Q14444 709 aaKnown RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 SLMAPQ14BN4 828 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 ZKSCAN8Q15776 578 aaPredicted RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 PFKFB4Q16877 469 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 TRMT12Q53H54 448 aaKnown RBP13.21□□□□□ -0.29
PDAP1-202ENST00000426447 PAGE2Q7Z2X7 111 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 CTAGE3PQ8IX95 158 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 ZNF611Q8N823 705 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 REG4Q9BYZ8 158 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 MAT2BQ9NZL9 334 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 PSME2Q9UL46 239 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 DSCAMO60469 2012 aa13.21□□□□□ -0.29
PDAP1-202ENST00000426447 MED12Q93074 2177 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 C1orf226A1L170 272 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 E7ESA3 106 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 HS3ST1O14792 307 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SEC14L5O43304 696 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 TLX2O43763 284 aaPredicted RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SOX30O94993 753 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SEMA3DO95025 777 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 ATP1B1P05026 303 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 GRK2P25098 689 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 IL12BP29460 328 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 MAPK12P53778 367 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 GPX6P59796 221 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 RPS4XP62701 263 aaKnown RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 DLG1Q12959 904 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 GTF2H2Q13888 395 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 EFR3AQ14156 821 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 PON3Q15166 354 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SGCBQ16585 318 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 RAET1LQ5VY80 246 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SLC48A1Q6P1K1 146 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 GTF2H2CQ6P1K8 395 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 GBP7Q8N8V2 638 aaPredicted RBP13.2□□□□□ -0.3
PDAP1-202ENST00000426447 FNDC9Q8TBE3 224 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 RNF122Q9H9V4 155 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 PPP4R1LQ9P1A2 415 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 ZNF639Q9UID6 485 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 PCDHA9Q9Y5H5 950 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
PDAP1-202ENST00000426447 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 H0YC42 278 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 TO15178 435 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 CLDN9O95484 217 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 CBX7O95931 251 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 THBDP07204 575 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 HK1P19367 917 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 CRABP2P29373 138 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 EMDP50402 254 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 SUCLG1P53597 346 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 B3GALT5-AS1P59052 145 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 RPS3AP61247 264 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 OCRLQ01968 901 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 ETFDHQ16134 617 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 CHRFAM7AQ494W8 412 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 GRTP1Q5TC63 336 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 LARP4Q71RC2 724 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 FAM214BQ7L5A3 538 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 GOLGA7Q7Z5G4 137 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 MILR1Q7Z6M3 343 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 CMC1Q7Z7K0 106 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 SLC35F6Q8N357 371 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 L3MBTL4Q8NA19 623 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 AKAP1Q92667 903 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 GTPBP3Q969Y2 492 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 NXNL1Q96CM4 212 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 KLHL29Q96CT2 875 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 SLC35A4Q96G79 324 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 MRPL1Q9BYD6 325 aaKnown RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 PRRG4Q9BZD6 226 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 STMN4Q9H169 189 aaPredicted RBP13.19□□□□□ -0.3
PDAP1-202ENST00000426447 DSN1Q9H410 356 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 FANCFQ9NPI8 374 aa13.19□□□□□ -0.3
PDAP1-202ENST00000426447 PFDN4Q9NQP4 134 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms