RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MAP10Q9P2G4 905 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ADAM21Q9UKJ8 722 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 PCDHGB6Q9Y5F9 930 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 PCDHGA10Q9Y5H3 936 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ASPDHA6ND91 283 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 EIF4E1BA6NMX2 242 aaKnown RBP22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SORBS2O94875 1100 aaKnown RBP22.55■■□□□ 1.2
VEGFA-209ENST00000425836 NKX2-2O95096 273 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 GSNP06396 782 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 NAGAP17050 411 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 FBXW4P57775 412 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 PLCXD2Q0VAA5 305 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SLC2A7Q6PXP3 512 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 GK5Q6ZS86 529 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ZNF621Q6ZSS3 439 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SLC16A11Q8NCK7 471 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 FBXO30Q8TB52 745 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SLC9A6Q92581 669 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 GTF2H4Q92759 462 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 ACTRT3Q9BYD9 372 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 Q9N2J8 555 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 SH2D2AQ9NP31 389 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 OR10H1Q9Y4A9 318 aa22.55■■□□□ 1.2
VEGFA-209ENST00000425836 CAPN14A8MX76 684 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 PPM1BO75688 479 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 TMED10P49755 219 aaKnown RBP22.54■■□□□ 1.2
VEGFA-209ENST00000425836 PSPHP78330 225 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 CYP27C1Q4G0S4 372 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 GOLM1Q8NBJ4 401 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 OR10G3Q8NGC4 313 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 OR5M3Q8NGP4 307 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 GPR151Q8TDV0 419 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 SLC35A5Q9BS91 424 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 NMUR2Q9GZQ4 415 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 EPN3Q9H201 632 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 TIMMDC1Q9NPL8 285 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 SLC6A13Q9NSD5 602 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 MRGBPQ9NV56 204 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 CBLCQ9ULV8 474 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 VPS4AQ9UN37 437 aa22.54■■□□□ 1.2
VEGFA-209ENST00000425836 FAF1Q9UNN5 650 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-209ENST00000425836 TLN1Q9Y490 2541 aaKnown RBP22.53■■□□□ 1.2
VEGFA-209ENST00000425836 NME2P1O60361 137 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 ALOX5P09917 674 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 NME2P22392 152 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 TRPC1P48995 793 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 DUSP5Q16690 384 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 RPUSD3Q6P087 351 aaKnown RBP22.53■■□□□ 1.2
VEGFA-209ENST00000425836 CDC73Q6P1J9 531 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 GALNTL5Q7Z4T8 443 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 TRIML2Q8N7C3 387 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 PSD4Q8NDX1 1056 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 FAM13CQ8NE31 585 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 PIK3R3Q92569 461 aa22.53■■□□□ 1.2
VEGFA-209ENST00000425836 OTUB1Q96FW1 271 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-209ENST00000425836 CHCHD2Q9Y6H1 151 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-209ENST00000425836 A0A1W2PP18 115 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 GXYLT2A0PJZ3 443 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 REM1O75628 298 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 C1QCP02747 245 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 CCL3P10147 92 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 PTPN6P29350 595 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 MAN2A2P49641 1150 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 KLF10Q13118 480 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 PAGE3Q5JUK9 113 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 C6orf10Q5SRN2 563 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 SAXO2Q658L1 398 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 DESI1Q6ICB0 168 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 DNAJC14Q6Y2X3 702 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-209ENST00000425836 PIGWQ7Z7B1 504 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 TMEM178AQ8NBL3 297 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 PAQR8Q8TEZ7 354 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 JADE3Q92613 823 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 NEURL3Q96EH8 262 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 PHF12Q96QT6 1004 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 SERHL2Q9H4I8 314 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 CHD6Q8TD26 2715 aa22.52■■□□□ 1.2
VEGFA-209ENST00000425836 SUV39H1O43463 412 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 TSPAN2O60636 221 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 SHOX2O60902 331 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-209ENST00000425836 ZCCHC18P0CG32 403 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 MATN1P21941 496 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 CHI3L1P36222 383 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-209ENST00000425836 PIGAP37287 484 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 RPS26P62854 115 aaKnown RBP22.51■■□□□ 1.19
VEGFA-209ENST00000425836 BCORP1Q8N888 145 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 TSPEARQ8WU66 669 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 HGDQ93099 445 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 SLC35A4Q96G79 324 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 SLC35G5Q96KT7 338 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 STACQ99469 402 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 PAIP1Q9H074 479 aaKnown RBP22.51■■□□□ 1.19
VEGFA-209ENST00000425836 PIGUQ9H490 435 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 DUSP22Q9NRW4 184 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 GIN1Q9NXP7 522 aa22.51■■□□□ 1.19
VEGFA-209ENST00000425836 SMG1Q96Q15 3661 aaKnown RBP22.51■■□□□ 1.19
VEGFA-209ENST00000425836 B8ZZF3 427 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 TP53I11O14683 189 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CCDC22O60826 627 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 UGT2B11O75310 529 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms